RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CPT1AP50416 773 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 HIC1Q14526 733 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 BMS1Q14692 1282 aaKnown RBP22.44■■□□□ 1.18
SQLE-206ENST00000523430 NAB2Q15742 525 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 NFRKBQ6P4R8 1299 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 ALKBH5Q6P6C2 394 aaKnown RBP22.44■■□□□ 1.18
SQLE-206ENST00000523430 SLC20A1Q8WUM9 679 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 TRIB2Q92519 343 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 ERO1AQ96HE7 468 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 SCLT1Q96NL6 688 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 CARD6Q9BX69 1037 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 TNFSF13BQ9Y275 285 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 CENPFP49454 3210 aa22.44■■□□□ 1.18
SQLE-206ENST00000523430 BUB1O43683 1085 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 TFRCP02786 760 aaKnown RBP22.43■■□□□ 1.18
SQLE-206ENST00000523430 MYL3P08590 195 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 CCDC172P0C7W6 258 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 USP8P40818 1118 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 MFAP3P55082 362 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 AMPD2Q01433 879 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 CAP1Q01518 475 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 FAM187BQ17R55 369 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 THNSL1Q8IYQ7 743 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 SLC30A5Q8TAD4 765 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 SHC3Q92529 594 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 DHX38Q92620 1227 aaKnown RBP22.43■■□□□ 1.18
SQLE-206ENST00000523430 VTI1AQ96AJ9 217 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 AP5M1Q9H0R1 490 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 HDAC6Q9UBN7 1215 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 RRN3P2A6NIE6 340 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 ZEB2O60315 1214 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 OSTNP61366 133 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 NOGQ13253 232 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 SCARA3Q6AZY7 606 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 FAM71AQ8IYT1 594 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 U2AF1L4Q8WU68 220 aaKnown RBP22.43■■□□□ 1.18
SQLE-206ENST00000523430 CPB2Q96IY4 423 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 ARID3AQ99856 593 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 FAM49AQ9H0Q0 323 aaPredicted RBP22.43■■□□□ 1.18
SQLE-206ENST00000523430 C1orf112Q9NSG2 853 aa22.43■■□□□ 1.18
SQLE-206ENST00000523430 MYADML2A6NDP7 307 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 ZC3H11AO75152 810 aaKnown RBP eCLIP22.42■■□□□ 1.181e-7■□□□□ 9.5
SQLE-206ENST00000523430 TOMM70O94826 608 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 ALDH1A1P00352 501 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 AKR1A1P14550 325 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 PSEN2P49810 448 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 PRKCZQ05513 592 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 NCBP1Q09161 790 aaKnown RBP22.42■■□□□ 1.18
SQLE-206ENST00000523430 TMEM62Q0P6H9 643 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 SPOPLQ6IQ16 392 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 PALB2Q86YC2 1186 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 FAM212AQ96EL1 285 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 PDZD7Q9H5P4 517 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 ACP6Q9NPH0 428 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 NRCAMQ92823 1304 aa22.42■■□□□ 1.18
SQLE-206ENST00000523430 FAM170AA1A519 330 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 HAS3O00219 553 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 TACC1O75410 805 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 CYBAP13498 195 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 FLT3LGP49771 235 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 FSCN1Q16658 493 aaKnown RBP22.41■■□□□ 1.18
SQLE-206ENST00000523430 C10orf76Q5T2E6 689 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 RUFY4Q6ZNE9 571 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 WDR49Q8IV35 697 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 TMEM192Q8IY95 271 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 TRIM58Q8NG06 486 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 MTMR12Q9C0I1 747 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 CDC23Q9UJX2 597 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 Q9Y3F1 56 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 GPR25O00155 361 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 CYP26A1O43174 497 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 ARF4P18085 180 aaPredicted RBP22.41■■□□□ 1.18
SQLE-206ENST00000523430 GCNT1Q02742 428 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 KIZQ2M2Z5 673 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 MNS1Q8NEH6 495 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 EPS8L1Q8TE68 723 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 CAPNS2Q96L46 248 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 AGPAT1Q99943 283 aa22.41■■□□□ 1.18
SQLE-206ENST00000523430 APOBEC3GQ9HC16 384 aaKnown RBP22.41■■□□□ 1.18
SQLE-206ENST00000523430 TSPAN1O60635 241 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 SGPL1O95470 568 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 TRAPPC11Q7Z392 1133 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 NOP9Q86U38 636 aaKnown RBP22.4■■□□□ 1.18
SQLE-206ENST00000523430 SLC47A2Q86VL8 602 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 NOX5Q96PH1 765 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 ALS2CR12Q96Q35 445 aa22.4■■□□□ 1.18
SQLE-206ENST00000523430 SEPT11Q9NVA2 429 aaKnown RBP22.4■■□□□ 1.18
SQLE-206ENST00000523430 NOCTQ9UK39 431 aaKnown RBP22.4■■□□□ 1.18
SQLE-206ENST00000523430 ANK1P16157 1881 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 MBLAC1A4D2B0 266 aaPredicted RBP22.39■■□□□ 1.18
SQLE-206ENST00000523430 TMCO5BA8MYB1 307 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 CXCL8P10145 99 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 FGFR4P22455 802 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 TRIM32Q13049 653 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 WDR44Q5JSH3 913 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 ZNF410Q86VK4 478 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 ADAMTS10Q9H324 1103 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 TAS2R14Q9NYV8 317 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 ATP8B3O60423 1300 aa22.39■■□□□ 1.18
SQLE-206ENST00000523430 TADA3O75528 432 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms