RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NBL1P41271 181 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 RRP1P56182 461 aaKnown RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CAMK1Q14012 370 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CPSF6Q16630 551 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 LY6KQ17RY6 165 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 PLEKHG4Q58EX7 1191 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CCDC62Q6P9F0 684 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 FAM214BQ7L5A3 538 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CHST3Q7LGC8 479 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 SLFN12Q8IYM2 578 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 C7orf31Q8N865 590 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 TMEM105Q8N8V8 129 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 CHURC1Q8WUH1 139 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 TOP1MTQ969P6 601 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 STRBPQ96SI9 672 aaKnown RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 HAUS7Q99871 368 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 ALG1Q9BT22 464 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 IFIH1Q9BYX4 1025 aaKnown RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 RANBP17Q9H2T7 1088 aaKnown RBP7.43□□□□□ -1.22
VPS13B-211ENST00000522802 EMSYQ7Z589 1322 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 ADGRA3Q8IWK6 1321 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 BAHCC1Q9P281 2608 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 USP24Q9UPU5 2620 aa7.43□□□□□ -1.22
VPS13B-211ENST00000522802 MAP1BP46821 2468 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 LOC102724159A0A0B4J2E5 919 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 PLA2G6O60733 806 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 SLITRK5O94991 958 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 GH1P01241 217 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 MMP1P03956 469 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 IFIT2P09913 472 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 TSPY3P0CV98 308 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 TSPY8P0CW00 308 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 THPOP40225 353 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 TDO2P48775 406 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 YARSP54577 528 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RPS6P62753 249 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RBM10P98175 930 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 ADAM15Q13444 863 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 PWP2Q15269 919 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 PTPN21Q16825 1174 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 KIAA0753Q2KHM9 967 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 CYP27C1Q4G0S4 372 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RNF207Q6ZRF8 634 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 SERINC5Q86VE9 423 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 ZNF444Q8N0Y2 327 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 ADSSL1Q8N142 457 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 TOP6BLQ8N6T0 577 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 FAM13CQ8NE31 585 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RMDN1Q96DB5 314 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 SEC16BQ96JE7 1060 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RPGRIP1Q96KN7 1286 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 SMOC2Q9H3U7 446 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 RC3H2Q9HBD1 1191 aaKnown RBP7.42□□□□□ -1.22
VPS13B-211ENST00000522802 GMIPQ9P107 970 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 EFR3BQ9Y2G0 817 aa7.42□□□□□ -1.22
VPS13B-211ENST00000522802 CHD8Q9HCK8 2581 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 RSPH10B2B2RC85 870 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 HAS3O00219 553 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 EOMESO95936 686 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 RSPH10BP0C881 870 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 SP100P23497 879 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-211ENST00000522802 ICAM3P32942 547 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 BMPR1AP36894 532 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 TFAP4Q01664 338 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 COASYQ13057 564 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 DGKDQ16760 1214 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 SEPT14Q6ZU15 432 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 CLASRPQ8N2M8 674 aaKnown RBP7.41□□□□□ -1.22
VPS13B-211ENST00000522802 FIBCD1Q8N539 461 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 VN1R2Q8NFZ6 395 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 NKD2Q969F2 451 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-211ENST00000522802 OSBP2Q969R2 916 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-211ENST00000522802 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 LMAN2LQ9H0V9 348 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 CAPN10Q9HC96 672 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 STX8Q9UNK0 236 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 FRMPD2Q68DX3 1309 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-211ENST00000522802 DOCK5Q9H7D0 1870 aa7.41□□□□□ -1.22
VPS13B-211ENST00000522802 SPTBN2O15020 2390 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 MEIS3P2A8K0S8 358 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 M0R2C6 588 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 GPAA1O43292 621 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 ARP10275 920 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 IMPDH2P12268 514 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 ATP5JP18859 108 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 CASTP20810 708 aaKnown RBP7.4□□□□□ -1.22
VPS13B-211ENST00000522802 NRIP1P48552 1158 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 LRP8Q14114 963 aa7.4□□□□□ -1.22
VPS13B-211ENST00000522802 SYDE2Q5VT97 1194 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms