RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 RAB20Q9NX57 234 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 AIPL1Q9NZN9 384 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
CTNNA1-236ENST00000522792 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.26
CTNNA1-236ENST00000522792 F8VZ95 297 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 GFPT2O94808 682 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 SERPING1P05155 500 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 CDC42EP1Q00587 391 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 KLHL30Q0D2K2 578 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 CATSPER4Q7RTX7 472 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 CCDC170Q8IYT3 715 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 TMEM40Q8WWA1 233 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 KAT5Q92993 513 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 LZTFL1Q9NQ48 299 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 C4BPAP04003 597 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 MCF2P10911 925 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 DARSP14868 501 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 CST5P28325 142 aaPredicted RBP16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 GRK4P32298 578 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 STAT1P42224 750 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 KIF11P52732 1056 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 ZACNQ401N2 412 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 GPR88Q9GZN0 384 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 TFR2Q9UP52 801 aa16.7■□□□□ 0.26
CTNNA1-236ENST00000522792 EIF3CLB5ME19 914 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 AKR1B10O60218 316 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 OFD1O75665 1012 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 CXCL8P10145 99 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 PIK3CAP42336 1068 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 IRF2BP2Q7Z5L9 587 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 RNF180Q86T96 592 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 EIF3CQ99613 913 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 HAUS4Q9H6D7 363 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 GRIN2DO15399 1336 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 A0A1B0GUA9 196 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 ZNF263O14978 683 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 HLA-DRAP01903 254 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 SOX5P35711 763 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 SNX17Q15036 470 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 PCSK9Q8NBP7 692 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 WNT8BQ93098 351 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 RPF1Q9H9Y2 349 aaKnown RBP16.69■□□□□ 0.26
CTNNA1-236ENST00000522792 PHACTR2O75167 634 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 CLSTN1O94985 981 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 IPO7O95373 1038 aaKnown RBP16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 VNN1O95497 513 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 ABL1P00519 1130 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 RFX1P22670 979 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 PRMT2P55345 433 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 TAF2Q6P1X5 1199 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 WDR49Q8IV35 697 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 NME8Q8N427 588 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 TATDN2Q93075 761 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 ADPGKQ9BRR6 497 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
CTNNA1-236ENST00000522792 SSU72P8A0A1W2PR75 194 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 EVI5O60447 810 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 NPTXRO95502 500 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 FERP16591 822 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 ACLYP53396 1101 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 KRT83P78385 493 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 PTK2Q05397 1052 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 ASTE1Q2TB18 679 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 KIAA1328Q86T90 577 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 EFCAB13Q8IY85 973 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 MYCP01106 439 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 CLTAP09496 248 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 CTSHP09668 335 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 NCBP1Q09161 790 aaKnown RBP16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 SPA17Q15506 151 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 LHX8Q68G74 356 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
CTNNA1-236ENST00000522792 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms