RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 PDZD4Q76G19 769 aaPredicted RBP4.17□□□□□ -1.74
PCM1-214ENST00000521338 NXPE1Q8N323 547 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 ACTRT2Q8TDY3 377 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 RSAD2Q8WXG1 361 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 WASF1Q92558 559 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 PHACTR3Q96KR7 559 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 TIMP4Q99727 224 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 AIFM2Q9BRQ8 373 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 BRIP1Q9BX63 1249 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 GALNT9Q9HCQ5 603 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 CASS4Q9NQ75 786 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 TBCCD1Q9NVR7 557 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 ZKSCAN5Q9Y2L8 839 aa4.17□□□□□ -1.74
PCM1-214ENST00000521338 ZNF891A8MT65 544 aaPredicted RBP4.16□□□□□ -1.74
PCM1-214ENST00000521338 GTF2F1P35269 517 aaKnown RBP eCLIP4.16□□□□□ -1.74
PCM1-214ENST00000521338 SQSTM1Q13501 440 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 CYP2A13Q16696 494 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 MED25Q71SY5 747 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 FAM43AQ8N2R8 423 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 LNX2Q8N448 690 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 ZNF610Q8N9Z0 462 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 ARMC5Q96C12 935 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 RNF31Q96EP0 1072 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 UROC1Q96N76 676 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 UNKLQ9H9P5 680 aaKnown RBP4.16□□□□□ -1.74
PCM1-214ENST00000521338 IFT57Q9NWB7 429 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 KAT6AQ92794 2004 aa4.16□□□□□ -1.74
PCM1-214ENST00000521338 POU3F3P20264 500 aaPredicted RBP4.15□□□□□ -1.75
PCM1-214ENST00000521338 FGFR4P22455 802 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 CANXP27824 592 aaKnown RBP4.15□□□□□ -1.75
PCM1-214ENST00000521338 SSBP2P81877 361 aaPredicted RBP4.15□□□□□ -1.75
PCM1-214ENST00000521338 KIAA0895LQ68EN5 471 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 ZNF572Q7Z3I7 529 aaPredicted RBP4.15□□□□□ -1.75
PCM1-214ENST00000521338 PASD1Q8IV76 773 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 REPS2Q8NFH8 660 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 OR14C36Q8NHC7 312 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 DDB2Q92466 427 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 FUBP3Q96I24 572 aaKnown RBP eCLIP4.15□□□□□ -1.75
PCM1-214ENST00000521338 ANO3Q9BYT9 981 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 WNT8AQ9H1J5 351 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 THG1LQ9NWX6 298 aaKnown RBP4.15□□□□□ -1.75
PCM1-214ENST00000521338 KCTD5Q9NXV2 234 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 CDY2AQ9Y6F7 541 aa4.15□□□□□ -1.75
PCM1-214ENST00000521338 PPP1R12AO14974 1030 aaPredicted RBP4.14□□□□□ -1.75
PCM1-214ENST00000521338 RFPL3O75679 317 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 PRSS23O95084 383 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 SNRPA1P09661 255 aaKnown RBP4.14□□□□□ -1.75
PCM1-214ENST00000521338 ALOX15P16050 662 aaPredicted RBP4.14□□□□□ -1.75
PCM1-214ENST00000521338 WT1P19544 449 aaPredicted RBP4.14□□□□□ -1.75
PCM1-214ENST00000521338 GCSHP23434 173 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 TERF2Q15554 542 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 ZNF480Q8WV37 535 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 KCNE5Q9UJ90 142 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 ENTPD2Q9Y5L3 495 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
PCM1-214ENST00000521338 GAS7O60861 476 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 HOXB6P17509 224 aaKnown RBP4.13□□□□□ -1.75
PCM1-214ENST00000521338 POU3F2P20265 443 aaPredicted RBP4.13□□□□□ -1.75
PCM1-214ENST00000521338 ITPKBP27987 946 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 VAV2P52735 878 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 MST1LQ2TV78 715 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 PITRM1Q5JRX3 1037 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 C11orf87Q6NUJ2 197 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 PTF1AQ7RTS3 328 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 TRMT2AQ8IZ69 625 aaKnown RBP4.13□□□□□ -1.75
PCM1-214ENST00000521338 PDPRQ8NCN5 879 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 SMC1BQ8NDV3 1235 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 SARAFQ96BY9 339 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 ZBTB9Q96C00 473 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 PTCD3Q96EY7 689 aaKnown RBP4.13□□□□□ -1.75
PCM1-214ENST00000521338 RNPEPQ9H4A4 650 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 MAGEC2Q9UBF1 373 aaPredicted RBP4.13□□□□□ -1.75
PCM1-214ENST00000521338 SIK3Q9Y2K2 1263 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 AOX1Q06278 1338 aa4.13□□□□□ -1.75
PCM1-214ENST00000521338 MANSC4A6NHS7 340 aaPredicted RBP4.12□□□□□ -1.75
PCM1-214ENST00000521338 LSP1P33241 339 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 HSD11B2P80365 405 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 PABPC4Q13310 644 aaKnown RBP eCLIP4.12□□□□□ -1.75
PCM1-214ENST00000521338 AKNAD1Q5T1N1 836 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 KIAA1614Q5VZ46 1190 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 KANSL2Q9H9L4 492 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 USP25Q9UHP3 1055 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 RPTORQ8N122 1335 aa4.12□□□□□ -1.75
PCM1-214ENST00000521338 TP73O15350 636 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 GPANK1O95872 356 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 ELFN1P0C7U0 828 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 SLC6A2P23975 617 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 PTPN7P35236 360 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 FOLR3P41439 243 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 KPNA1P52294 538 aaPredicted RBP4.11□□□□□ -1.75
PCM1-214ENST00000521338 RAP2BP61225 183 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 FRMD7Q6ZUT3 714 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 Q6ZVL8 140 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 THNSL2Q86YJ6 484 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 DRC7Q8IY82 874 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 Q8NA96 180 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 HASPINQ8TF76 798 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 HEPHQ9BQS7 1158 aa4.11□□□□□ -1.75
PCM1-214ENST00000521338 SPTLC3Q9NUV7 552 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms