RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 VRK1Q99986 396 aaPredicted RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 MRI1Q9BV20 369 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 LSM14BQ9BX40 385 aaKnown RBP6.63□□□□□ -1.35
SKP1-208ENST00000521216 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 POGKQ9P215 609 aa6.63□□□□□ -1.35
SKP1-208ENST00000521216 ATRNL1Q5VV63 1379 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 GOLGA6CA6NDK9 693 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 GOLGA6BA6NDN3 693 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 LRRC14BA6NHZ5 514 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 TBKBP1A7MCY6 615 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 CXorf49A8MYA2 514 aaPredicted RBP6.62□□□□□ -1.35
SKP1-208ENST00000521216 B5MCH6 92 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 TEX33O43247 280 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 SGTAO43765 313 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 FTLP02792 175 aaPredicted RBP6.62□□□□□ -1.35
SKP1-208ENST00000521216 GOLGA6DP0CG33 693 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 ZNF280AP59817 542 aaPredicted RBP6.62□□□□□ -1.35
SKP1-208ENST00000521216 CRHR2Q13324 411 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 MTM1Q13496 603 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 ARHGAP29Q52LW3 1261 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 ATAT1Q5SQI0 421 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 EFCAB12Q6NXP0 572 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 Q6ZSN1 163 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 RNF169Q8NCN4 708 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 CASKIN2Q8WXE0 1202 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 TFAP2CQ92754 450 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 PHACTR3Q96KR7 559 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 KCNH6Q9H252 994 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 SLC12A5Q9H2X9 1139 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 CD248Q9HCU0 757 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 GOLGA6AQ9NYA3 693 aa6.62□□□□□ -1.35
SKP1-208ENST00000521216 KIAA0391O15091 583 aaKnown RBP6.61□□□□□ -1.35
SKP1-208ENST00000521216 SNRPA1P09661 255 aaKnown RBP6.61□□□□□ -1.35
SKP1-208ENST00000521216 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 CLRN1P58418 232 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 ATP2B3Q16720 1220 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 THEMIS2Q5TEJ8 643 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 NXNQ6DKJ4 435 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 ZNF529Q6P280 563 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 UBE3BQ7Z3V4 1068 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 MDGA1Q8NFP4 955 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 ZFP28Q8NHY6 868 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 SLC35G2Q8TBE7 412 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 NSUN6Q8TEA1 469 aaKnown RBP6.61□□□□□ -1.35
SKP1-208ENST00000521216 RGMAQ96B86 450 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 GPR87Q9BY21 358 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 CPEB1Q9BZB8 566 aaKnown RBP6.61□□□□□ -1.35
SKP1-208ENST00000521216 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 MAN1C1Q9NR34 630 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 PCDHA3Q9Y5H8 950 aa6.61□□□□□ -1.35
SKP1-208ENST00000521216 TCRBV7S2A1N4TA0A589 114 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 CYP27B1O15528 508 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 CTNND1O60716 968 aaKnown RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 CTXN1P60606 82 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 ATP8B2P98198 1209 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 CNGB1Q14028 1251 aaPredicted RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 RAB39AQ14964 217 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 PRKD1Q15139 912 aaPredicted RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 ATXN7L2Q5T6C5 722 aaPredicted RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 MAMDC4Q6UXC1 1216 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 Q6ZRM9 215 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 DOK3Q7L591 496 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 SH2D3CQ8N5H7 860 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 C3orf20Q8ND61 904 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 TTC8Q8TAM2 541 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 IFI44Q8TCB0 444 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 DIS3LQ8TF46 1054 aaKnown RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 C1GALT1C1Q96EU7 318 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 MRGPRX4Q96LA9 322 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 ACO2Q99798 780 aaKnown RBP6.6□□□□□ -1.35
SKP1-208ENST00000521216 KLC2Q9H0B6 622 aa6.6□□□□□ -1.35
SKP1-208ENST00000521216 VSTM5A8MXK1 200 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 ALDH2P05091 517 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 SELENOPP49908 381 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 MAP2K6P52564 334 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 GFOD2Q3B7J2 385 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 TAAR9Q96RI9 348 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 DMRTA2Q96SC8 542 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 C11orf54Q9H0W9 315 aaPredicted RBP6.59□□□□□ -1.35
SKP1-208ENST00000521216 CALCOCO1Q9P1Z2 691 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 SLC23A1Q9UHI7 598 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 CNOT11Q9UKZ1 510 aaKnown RBP6.59□□□□□ -1.35
SKP1-208ENST00000521216 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 POLHQ9Y253 713 aa6.59□□□□□ -1.35
SKP1-208ENST00000521216 ARID1BQ8NFD5 2236 aaPredicted RBP6.59□□□□□ -1.35
SKP1-208ENST00000521216 PNPLA7Q6ZV29 1317 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 GOLGA6L6A8MZA4 724 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 H3BUI4 141 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 MUSKO15146 869 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 PJA2O43164 708 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 POMCP01189 267 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 MALP21145 153 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 MAN2A2P49641 1150 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 SCNN1GP51170 649 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 TLE1Q04724 770 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 NOGQ13253 232 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 VPS72Q15906 364 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms