RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 NCBP1Q09161 790 aaKnown RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 PAK1Q13153 545 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 NCAPHQ15003 741 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 ZBTB6Q15916 424 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SKOR2Q2VWA4 1001 aaPredicted RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 GLRA4Q5JXX5 417 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 GPD1LQ8N335 351 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 MLKLQ8NB16 471 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 TMEM117Q9H0C3 514 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 TBC1D13Q9NVG8 400 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 MRPL42Q9Y6G3 142 aaKnown RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SMIM28A0A1B0GU29 152 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 F8W810 466 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 PSMA7O14818 248 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 NFICP08651 508 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 KCNE1P15382 129 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 NR2F2P24468 414 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 SNRNP35Q16560 246 aaKnown RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 TMEM173Q86WV6 379 aaPredicted RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 BCL7CQ8WUZ0 217 aaPredicted RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 C18orf25Q96B23 403 aaPredicted RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 MFSD14AQ96MC6 490 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 RAD9AQ99638 391 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 PAAF1Q9BRP4 392 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 GTPBP4Q9BZE4 634 aaKnown RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
AP3B1-203ENST00000517940 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 PARP2Q9UGN5 583 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
AP3B1-203ENST00000517940 TSC2P49815 1807 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 POMCP01189 267 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 CA3P07451 260 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 PBX3P40426 434 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 DLG4P78352 724 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 LRRC63Q05C16 580 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 STX1AQ16623 288 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 CLP1Q92989 425 aaKnown RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 SYAP1Q96A49 352 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 MTIF3Q9H2K0 278 aaKnown RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 GOLGA2P5Q9HBQ8 144 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 RBAKQ9NYW8 714 aaPredicted RBP12.86□□□□□ -0.35
AP3B1-203ENST00000517940 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 PRUNE2Q8WUY3 3088 aa12.86□□□□□ -0.35
AP3B1-203ENST00000517940 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 EPOPA6NHQ4 379 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 PPEF2O14830 753 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 TLL1O43897 1013 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 KIF20AO95235 890 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 EFEMP2O95967 443 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 CLDN10P78369 228 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
AP3B1-203ENST00000517940 TAP1Q03518 808 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 ADAM9Q13443 819 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 PSMD6Q15008 389 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 IQCB1Q15051 598 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 GLB1LQ6UWU2 654 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
AP3B1-203ENST00000517940 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms