RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CRNNQ9UBG3 495 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPP1R1BQ9UD71 204 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 STK39Q9UEW8 545 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATPIF1Q9UII2 106 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 INTUQ9ULD6 942 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 TMCC3Q9ULS5 477 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 NOB1Q9ULX3 412 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 MAFFQ9ULX9 164 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 CHMP2BQ9UQN3 213 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 TLR6Q9Y2C9 796 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 FAM32AQ9Y421 112 aaKnown RBP5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SAR1BQ9Y6B6 198 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 SQORQ9Y6N5 450 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 USH1CQ9Y6N9 552 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 DISP1Q96F81 1524 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 AOX1Q06278 1338 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 PITPNM2Q9BZ72 1349 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 USP31Q70CQ4 1352 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 ABCC12Q96J65 1359 aa5.16□□□□□ -1.58
HMGB1P19-201ENST00000517578 POGZQ7Z3K3 1410 aa5.15□□□□□ -1.58
HMGB1P19-201ENST00000517578 EFCAB6Q5THR3 1501 aa5.15□□□□□ -1.58
HMGB1P19-201ENST00000517578 A0A1W2PQ27 194 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 A0A1W2PQ64 194 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 A0A1W2PQD8 194 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 KANSL1LA0AUZ9 987 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MACROD2A1Z1Q3 448 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SYCE1LA8MT33 242 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 HIP1O00291 1037 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 O00370 1275 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 HGSO14964 777 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 KMOO15229 486 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TEX28O15482 410 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC26A4O43511 780 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SGTAO43765 313 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 VAMP4O75379 141 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 GLRX3O76003 335 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ASMTLO95671 621 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MYZAPP0CAP1 466 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 PRLRP16471 622 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TFE3P19532 575 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 M6PRP20645 277 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ATP5DP30049 168 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 VHLP40337 213 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ETV3P41162 512 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CETN2P41208 172 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MSH2P43246 934 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ST13P50502 369 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 KIF11P52732 1056 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CACNA2D1P54289 1103 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 RPL26P61254 145 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 HPCAP84074 193 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 OCRLQ01968 901 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MYL5Q02045 173 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MCL1Q07820 350 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TBL3Q12788 808 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 IKZF1Q13422 519 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRIM14Q14142 442 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 IMMTQ16891 758 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARL13BQ3SXY8 428 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ODF2Q5BJF6 829 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 WIPI1Q5MNZ9 446 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZBTB37Q5TC79 503 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MAP3K21Q5TCX8 1036 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TCERG1LQ5VWI1 586 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRIM68Q6AZZ1 485 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 KIAA1841Q6NSI8 718 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 PDXDC1Q6P996 788 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CCDC62Q6P9F0 684 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TTC23LQ6PF05 361 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 AGMOQ6ZNB7 445 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF662Q6ZS27 426 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF804AQ7Z570 1209 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 GRAMD2AQ8IUY3 354 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 RHOT2Q8IXI1 618 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SPARTQ8N0X7 666 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TTC30BQ8N4P2 665 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TCP11L2Q8N4U5 519 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MLKLQ8NB16 471 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TNIP2Q8NFZ5 429 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 UHMK1Q8TAS1 419 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ATL1Q8WXF7 558 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 GAL3ST3Q96A11 431 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 EVI5LQ96CN4 794 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 KLHL29Q96CT2 875 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHMP6Q96FZ7 201 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 RNPC3Q96LT9 517 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CDC5LQ99459 802 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MAP3K14Q99558 947 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SYT15Q9BQS2 421 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAM167BQ9BTA0 163 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TUBB6Q9BUF5 446 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC7A5P2Q9GIP4 190 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 STMN4Q9H169 189 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MIR1-1HGQ9H1L0 117 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ALDH8A1Q9H2A2 487 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 HAUS4Q9H6D7 363 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZSWIM4Q9H7M6 989 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 RNPEPL1Q9HAU8 725 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 TCF7L2Q9NQB0 619 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms