RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
C8orf88-201ENST00000517562 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
C8orf88-201ENST00000517562 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
C8orf88-201ENST00000517562 PRG3Q9Y2Y8 225 aaPredicted RBP17.11■□□□□ 0.33
C8orf88-201ENST00000517562 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
C8orf88-201ENST00000517562 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
C8orf88-201ENST00000517562 SMIM28A0A1B0GU29 152 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 H3BNC9 293 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 NRP1O14786 923 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 FGF18O76093 207 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 MYL1P05976 194 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 CLTAP09496 248 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 WNT7BP56706 349 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 PSMD2Q13200 908 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 ALCAMQ13740 583 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 ENOX2Q16206 610 aaKnown RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 SLFN12LQ6IEE8 588 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 ALKAL1Q6UXT8 129 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 CCDC47Q96A33 483 aaKnown RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 TMEM206Q9H813 350 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 RPF1Q9H9Y2 349 aaKnown RBP17.1■□□□□ 0.33
C8orf88-201ENST00000517562 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
C8orf88-201ENST00000517562 ALDH2P05091 517 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 THP07101 528 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 LAG3P18627 525 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 SCP2P22307 547 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
C8orf88-201ENST00000517562 CYP2J2P51589 502 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 GUCY2FP51841 1108 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
C8orf88-201ENST00000517562 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 SNX27Q96L92 541 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 CPSF3Q9UKF6 684 aaKnown RBP17.09■□□□□ 0.33
C8orf88-201ENST00000517562 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
C8orf88-201ENST00000517562 C5orf67F2Z3F1 127 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 INPPL1O15357 1258 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 SMC2O95347 1197 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 RB1P06400 928 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 ABCD1P33897 745 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 IRS1P35568 1242 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 ERVFC1P60507 584 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 DSC1Q08554 894 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 CAMK1Q14012 370 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 KCNB1Q14721 858 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 NAB2Q15742 525 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 KNOP1Q1ED39 458 aaKnown RBP17.08■□□□□ 0.32
C8orf88-201ENST00000517562 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 SAMD11Q96NU1 681 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 PPP1R10Q96QC0 940 aaKnown RBP17.08■□□□□ 0.32
C8orf88-201ENST00000517562 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
C8orf88-201ENST00000517562 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 SCN1AP35498 2009 aa17.08■□□□□ 0.32
C8orf88-201ENST00000517562 TTC26A0AVF1 554 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 FOSL2P15408 326 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 GARTP22102 1010 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 PRCPP42785 496 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 GRIK3Q13003 919 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 XKR4Q5GH76 650 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 AUTS2Q8WXX7 1259 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 C11orf84Q9BUA3 381 aaPredicted RBP17.07■□□□□ 0.32
C8orf88-201ENST00000517562 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 KCTD10Q9H3F6 313 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 HSPBP1Q9NZL4 362 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
C8orf88-201ENST00000517562 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 TRANK1O15050 2925 aa17.07■□□□□ 0.32
C8orf88-201ENST00000517562 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
C8orf88-201ENST00000517562 BMP6P22004 513 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 TUSC3Q13454 348 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 CBWD2Q8IUF1 395 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 MICAL1Q8TDZ2 1067 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 B3GALT6Q96L58 329 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
C8orf88-201ENST00000517562 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms