RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CPSF2Q9P2I0 782 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 HEY1Q9Y5J3 304 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 MYH8P13535 1937 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 GOLGA8MH3BSY2 632 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SLC16A3O15427 465 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 LCA5LO95447 670 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZBED1O96006 694 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 BRAFP15056 766 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 EPHA7Q15375 998 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SURF1Q15526 300 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 LONRF1Q17RB8 773 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 EP400NLQ6ZTU2 488 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SRRM1Q8IYB3 904 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 STK33Q9BYT3 514 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 TPX2Q9ULW0 747 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 EIF4E1BA6NMX2 242 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 PLSCR1O15162 318 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 SFNP31947 248 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF449Q6P9G9 518 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 PCGF5Q86SE9 256 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 TGS1Q96RS0 853 aaKnown RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 PITPNM3Q9BZ71 974 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 POLR3FQ9H1D9 316 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 IFT122Q9HBG6 1241 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 GINM1Q9NU53 330 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
PCDHGA1-202ENST00000517417 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 RGL2O15211 777 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SCP2P22307 547 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 KIF2BQ8N4N8 673 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 CFAP57Q96MR6 1250 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 NUP85Q9BW27 656 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 KDM4CQ9H3R0 1056 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SPATS2LQ9NUQ6 558 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 USP15Q9Y4E8 981 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 CES2O00748 559 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 HGSNATQ68CP4 663 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 DSTYKQ6XUX3 929 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 KIRREL3Q8IZU9 778 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF564Q8TBZ8 553 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 EPS8L3Q8TE67 593 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 FAM167BQ9BTA0 163 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMEM39BQ9GZU3 492 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 FGFR1OP2Q9NVK5 253 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 GPC4O75487 556 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 FMO5P49326 533 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 TMEM119Q4V9L6 283 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 KIAA1841Q6NSI8 718 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 AGPAT1Q99943 283 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 NUF2Q9BZD4 464 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 KIAA1586Q9HCI6 787 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 INTUQ9ULD6 942 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ABT1Q9ULW3 272 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 CYP26A1O43174 497 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 CASP4P49662 377 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 TWF2Q6IBS0 349 aaKnown RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ARMCX2Q7L311 632 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SPATA21Q7Z572 469 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 FBXO25Q8TCJ0 367 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 MTMR9Q96QG7 549 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 VCXQ9H320 206 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 ETNK1Q9HBU6 452 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 SAYSD1Q9NPB0 183 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
PCDHGA1-202ENST00000517417 PITPNM2Q9BZ72 1349 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 GPR75-ASB3A0A0A6YYF3 556 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 MED24O75448 989 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 ZNF572Q7Z3I7 529 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 C18orf8Q96DM3 657 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 THAP2Q9H0W7 228 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 CARD9Q9H257 536 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 TLR2O60603 784 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 ACOT2P49753 483 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 NFIAQ12857 509 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
PCDHGA1-202ENST00000517417 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms