RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 BOD1Q96IK1 185 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM74Q96NL1 305 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZSWIM1Q9BR11 485 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 LGR4Q9BXB1 951 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 EPC1Q9H2F5 836 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 NKX2-4Q9H2Z4 354 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 GALNT9Q9HCQ5 603 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 SAE1Q9UBE0 346 aaPredicted RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 APEX2Q9UBZ4 518 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 AKT3Q9Y243 479 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 NOX1Q9Y5S8 564 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 COL16A1Q07092 1604 aaPredicted RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM88BA6NKF7 163 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 MINDY4BA8MYZ0 360 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 PRR5-ARHGAP8B1AHC4 643 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 SMIM22K7EJ46 135 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 SCAMP3O14828 347 aaKnown RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 MSCO60682 206 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 APOHP02749 345 aaPredicted RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 RBP3P10745 1247 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 GBP2P32456 591 aaPredicted RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 KRTAP10-10P60014 251 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 CYP2A13Q16696 494 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 PRSS53Q2L4Q9 553 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF672Q499Z4 452 aaPredicted RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ANKS6Q68DC2 871 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ALG1LQ6GMV1 187 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 WDR48Q8TAF3 677 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ASB5Q8WWX0 329 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 INPP4AQ96PE3 977 aaPredicted RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ARHGAP39Q9C0H5 1083 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 GBP3Q9H0R5 595 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 CD93Q9NPY3 652 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 RIC8BQ9NVN3 520 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 KLHL11Q9NVR0 708 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 HEY2Q9UBP5 337 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 MAGED2Q9UNF1 606 aaPredicted RBP0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 HDAC5Q9UQL6 1122 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 NTNG1Q9Y2I2 539 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 SUGT1Q9Y2Z0 365 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 WDR17Q8IZU2 1322 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ROBO2Q9HCK4 1378 aa0.03□□□□□ -2.4
RNU6-542P-201ENST00000516405 ATRXP46100 2492 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 IGKV3D-15A0A087WSY6 115 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 MTSS1O43312 755 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF500O60304 480 aaPredicted RBP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GREM1O60565 184 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PAPSS2O95340 614 aaPredicted RBP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 HNRNPLP14866 589 aaKnown RBP eCLIP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 EIF4BP23588 611 aaKnown RBP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 CASRP41180 1078 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 SOX8P57073 446 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 KRTAP12-4P60329 112 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 FAM153CQ494X1 144 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ACBD5Q5T8D3 534 aaPredicted RBP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PLEKHA7Q6IQ23 1121 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 VWA1Q6PCB0 445 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 C15orf39Q6ZRI6 1047 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PPIL6Q8IXY8 311 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 RNF169Q8NCN4 708 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 OR56A1Q8NGH5 318 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF398Q8TD17 642 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ATP2A3Q93084 1043 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 KCNJ15Q99712 375 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 RPS10P5Q9NQ39 176 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZBTB40Q9NUA8 1239 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 FAM120CQ9NX05 1096 aaKnown RBP0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZIM2Q9NZV7 527 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ATP11BQ9Y2G3 1177 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 NUB1Q9Y5A7 615 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 NPFFR2Q9Y5X5 522 aa0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GCOM1H8Y6P7 765 aaPredicted RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 PYCARD-AS1I3L0S3 204 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 C4BPAP04003 597 aaKnown RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 GNAT1P11488 350 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 DRD4P21917 467 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 APEX1P27695 318 aaKnown RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 ECI1P42126 302 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 VAV2P52735 878 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 CHN2P52757 468 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 DLX5P56178 289 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 SPIRE1Q08AE8 756 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 EIF4EBP2Q13542 120 aaPredicted RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 UBXN2BQ14CS0 331 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 TXNRD1Q16881 649 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 NADSYN1Q6IA69 706 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MIS18BP1Q6P0N0 1132 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 RUFY4Q6ZNE9 571 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 TSHZ1Q6ZSZ6 1077 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MAMDC2Q7Z304 686 aaPredicted RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 CHSY1Q86X52 802 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 THNSL2Q86YJ6 484 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 RHOT2Q8IXI1 618 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MIB2Q96AX9 1013 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 MOV10L1Q9BXT6 1211 aaKnown RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 C14orf93Q9H972 538 aaKnown RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 ING3Q9NXR8 418 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 SH3BP4Q9P0V3 963 aa0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 KIAA1522Q9P206 1035 aaPredicted RBP0.01□□□□□ -2.41
RNU6-542P-201ENST00000516405 POGKQ9P215 609 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms