RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 ZNF558Q96NG5 402 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 CBWD1Q9BRT8 395 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 FAM213AQ9BRX8 229 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 TMEM175Q9BSA9 504 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 C17orf80Q9BSJ5 609 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
SNF8-215ENST00000515572 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
SNF8-215ENST00000515572 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 MIOSQ9NXC5 875 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 MAPK8IP1Q9UQF2 711 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
SNF8-215ENST00000515572 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 PTGESO14684 152 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 PSMA7O14818 248 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ZC3H11AO75152 810 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNF8-215ENST00000515572 DDHD2O94830 711 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 IL18RAPO95256 599 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ADRB2P07550 413 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 PRCPP42785 496 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 BCAR1P56945 870 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 TUSC3Q13454 348 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 MORC3Q14149 939 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
SNF8-215ENST00000515572 NFIL3Q16649 462 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ZBTB41Q5SVQ8 909 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ZNF280BQ86YH2 543 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 COLGALT2Q8IYK4 626 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 SMYD4Q8IYR2 804 aaPredicted RBP12.95□□□□□ -0.34
SNF8-215ENST00000515572 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 SAAL1Q96ER3 474 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 PPP1R10Q96QC0 940 aaKnown RBP12.95□□□□□ -0.34
SNF8-215ENST00000515572 PCIF1Q9H4Z3 704 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 ASB7Q9H672 318 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 HSPBP1Q9NZL4 362 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 DERAQ9Y315 318 aa12.95□□□□□ -0.34
SNF8-215ENST00000515572 LAMA2P24043 3122 aaKnown RBP12.95□□□□□ -0.34
SNF8-215ENST00000515572 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 H3BNC9 293 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 BIN1O00499 593 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
SNF8-215ENST00000515572 NR3C1P04150 777 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 ALDH2P05091 517 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 GALTP07902 379 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
SNF8-215ENST00000515572 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 CRELD2Q6UXH1 353 aaPredicted RBP12.94□□□□□ -0.34
SNF8-215ENST00000515572 BRSK2Q8IWQ3 736 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 DHTKD1Q96HY7 919 aaPredicted RBP12.94□□□□□ -0.34
SNF8-215ENST00000515572 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 UROC1Q96N76 676 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 CERS4Q9HA82 394 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
SNF8-215ENST00000515572 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 STK39Q9UEW8 545 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 MTUS1Q9ULD2 1270 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 PLAGL2Q9UPG8 496 aa12.94□□□□□ -0.34
SNF8-215ENST00000515572 CHD9Q3L8U1 2897 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 CLIC2O15247 247 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 MEFVO15553 781 aaPredicted RBP12.93□□□□□ -0.34
SNF8-215ENST00000515572 EXOC3O60645 756 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 BMP6P22004 513 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SLC11A1P49279 550 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 CYP2J2P51589 502 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 KRT17Q04695 432 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 UBE3AQ05086 875 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 GPM6BQ13491 265 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SURF1Q15526 300 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 NAB2Q15742 525 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
SNF8-215ENST00000515572 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 CENPPQ6IPU0 288 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SPRED2Q7Z698 418 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 NT5DC4Q86YG4 428 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
SNF8-215ENST00000515572 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
SNF8-215ENST00000515572 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
SNF8-215ENST00000515572 TSG101Q99816 390 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms