RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ENGASEQ8NFI3 743 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 PPP2R3CQ969Q6 453 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 IGSF21Q96ID5 467 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 COLEC11Q9BWP8 271 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 SLC38A7Q9NVC3 462 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 STYXL1Q9Y6J8 313 aa28.31■■■□□ 2.12
DDR1-279ENST00000515529 TDRD15B5MCY1 1934 aaKnown RBP28.3■■■□□ 2.12
DDR1-279ENST00000515529 TISP43B9A030 160 aa28.3■■■□□ 2.12
DDR1-279ENST00000515529 GADD45BO75293 160 aaPredicted RBP28.3■■■□□ 2.12
DDR1-279ENST00000515529 PPP2R3AQ06190 1150 aa28.3■■■□□ 2.12
DDR1-279ENST00000515529 SNW1Q13573 536 aaKnown RBP28.3■■■□□ 2.12
DDR1-279ENST00000515529 SKIV2LQ15477 1246 aaKnown RBP28.3■■■□□ 2.12
DDR1-279ENST00000515529 NSUN3Q9H649 340 aaKnown RBP28.3■■■□□ 2.12
DDR1-279ENST00000515529 PLEKHA5Q9HAU0 1116 aa28.3■■■□□ 2.12
DDR1-279ENST00000515529 ENTPD7Q9NQZ7 604 aa28.3■■■□□ 2.12
DDR1-279ENST00000515529 STK39Q9UEW8 545 aa28.3■■■□□ 2.12
DDR1-279ENST00000515529 CDH23Q9H251 3354 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 SMIM28A0A1B0GU29 152 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 CXCL8P10145 99 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 UBE2HP62256 183 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 DPYDQ12882 1025 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 ARMCX5Q6P1M9 558 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 EPM2AIP1Q7L775 607 aaPredicted RBP28.29■■■□□ 2.12
DDR1-279ENST00000515529 ZNF507Q8TCN5 953 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 TIGD1Q96MW7 591 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 IKZF4Q9H2S9 585 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 CNTN3Q9P232 1028 aa28.29■■■□□ 2.12
DDR1-279ENST00000515529 CASTOR2A6NHX0 329 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 GARTP22102 1010 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 DNAJB1P25685 340 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 CA8P35219 290 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 TNFSF9P41273 254 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 SLC10A6Q3KNW5 377 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 XKR4Q5GH76 650 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 PDE12Q6L8Q7 609 aaKnown RBP28.28■■■□□ 2.12
DDR1-279ENST00000515529 ALKAL1Q6UXT8 129 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 TMEM173Q86WV6 379 aaPredicted RBP28.28■■■□□ 2.12
DDR1-279ENST00000515529 NELFCDQ8IXH7 590 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 NOC3LQ8WTT2 800 aaKnown RBP28.28■■■□□ 2.12
DDR1-279ENST00000515529 FAM212AQ96EL1 285 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 PPP1R10Q96QC0 940 aaKnown RBP28.28■■■□□ 2.12
DDR1-279ENST00000515529 CXCL16Q9H2A7 254 aa28.28■■■□□ 2.12
DDR1-279ENST00000515529 PRRC2BQ5JSZ5 2229 aaKnown RBP28.27■■■□□ 2.12
DDR1-279ENST00000515529 PRPF40AO75400 957 aaKnown RBP28.27■■■□□ 2.12
DDR1-279ENST00000515529 KIF20AO95235 890 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 SMC2O95347 1197 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 LDHAP00338 332 aaKnown RBP28.27■■■□□ 2.12
DDR1-279ENST00000515529 KCNE1P15382 129 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 ACOT2P49753 483 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 HS2ST1Q7LGA3 356 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 TMC7Q7Z402 723 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 DDX53Q86TM3 631 aaKnown RBP28.27■■■□□ 2.12
DDR1-279ENST00000515529 SCFD1Q8WVM8 642 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 GBP4Q96PP9 640 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 TCF25Q9BQ70 676 aa28.27■■■□□ 2.12
DDR1-279ENST00000515529 CPSF3Q9UKF6 684 aaKnown RBP28.27■■■□□ 2.12
DDR1-279ENST00000515529 TULP1O00294 542 aaPredicted RBP28.26■■■□□ 2.11
DDR1-279ENST00000515529 ADSSP30520 456 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 PNOCQ13519 176 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 CAMK1Q14012 370 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 HSP90AA2PQ14568 343 aaPredicted RBP28.26■■■□□ 2.11
DDR1-279ENST00000515529 ZBTB41Q5SVQ8 909 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 PLPP4Q5VZY2 271 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 CD302Q8IX05 232 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 VPS52Q8N1B4 723 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 UROC1Q96N76 676 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 NGRNQ9NPE2 291 aaKnown RBP28.26■■■□□ 2.11
DDR1-279ENST00000515529 RMND1Q9NWS8 449 aa28.26■■■□□ 2.11
DDR1-279ENST00000515529 KIAA0391O15091 583 aaKnown RBP28.25■■■□□ 2.11
DDR1-279ENST00000515529 FAM189A1O60320 539 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 TADA2AO75478 443 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 RHOBTB3O94955 611 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 IRS1P35568 1242 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 STK4Q13043 487 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 ENOX2Q16206 610 aaKnown RBP28.25■■■□□ 2.11
DDR1-279ENST00000515529 TCEAL5Q5H9L2 206 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 BCL7CQ8WUZ0 217 aaPredicted RBP28.25■■■□□ 2.11
DDR1-279ENST00000515529 KIF12Q96FN5 646 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 FAM213AQ9BRX8 229 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 PCIF1Q9H4Z3 704 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.25■■■□□ 2.11
DDR1-279ENST00000515529 PLXNA4Q9HCM2 1894 aa28.25■■■□□ 2.11
DDR1-279ENST00000515529 TTC26A0AVF1 554 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 LACTBL1A8MY62 500 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 XPOTO43592 962 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 ERVFC1P60507 584 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 SNRPFP62306 86 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 SMC1AQ14683 1233 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 KCNB1Q14721 858 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 NAB2Q15742 525 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 KNOP1Q1ED39 458 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 BMT2Q1RMZ1 405 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 RABGGTAQ92696 567 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 SAAL1Q96ER3 474 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 ZMAT2Q96NC0 199 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 TSPAN18Q96SJ8 248 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 CBWD1Q9BRT8 395 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 MARCH5Q9NX47 278 aa28.24■■■□□ 2.11
DDR1-279ENST00000515529 CGNQ9P2M7 1197 aaKnown RBP28.24■■■□□ 2.11
DDR1-279ENST00000515529 ADAM28Q9UKQ2 775 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms