RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 MICAL1Q8TDZ2 1067 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 IGSF21Q96ID5 467 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 SNX27Q96L92 541 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 EXOC1Q9NV70 894 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 CACNG4Q9UBN1 327 aa15.23■□□□□ 0.03
USP46-209ENST00000514536 PRG3Q9Y2Y8 225 aaPredicted RBP15.23■□□□□ 0.03
USP46-209ENST00000514536 CARNS1A5YM72 827 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 EIF3DO15371 548 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP46-209ENST00000514536 MEFVO15553 781 aaPredicted RBP15.22■□□□□ 0.03
USP46-209ENST00000514536 NR1I2O75469 434 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 RPN1P04843 607 aaKnown RBP15.22■□□□□ 0.03
USP46-209ENST00000514536 HOXD13P35453 343 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 IRS1P35568 1242 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 ERVFC1P60507 584 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 DPYDQ12882 1025 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 TUSC3Q13454 348 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 POSTNQ15063 836 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 KYAT1Q16773 422 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 BCL7CQ8WUZ0 217 aaPredicted RBP15.22■□□□□ 0.03
USP46-209ENST00000514536 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
USP46-209ENST00000514536 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
USP46-209ENST00000514536 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 FAM189A1O60320 539 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 PRPF40AO75400 957 aaKnown RBP15.21■□□□□ 0.03
USP46-209ENST00000514536 CXCL8P10145 99 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 ACOT2P49753 483 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 STK4Q13043 487 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 PSMD2Q13200 908 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 SCFD1Q8WVM8 642 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
USP46-209ENST00000514536 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.03
USP46-209ENST00000514536 COLEC11Q9BWP8 271 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 RPF1Q9H9Y2 349 aaKnown RBP15.21■□□□□ 0.03
USP46-209ENST00000514536 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 RALGAPA2Q2PPJ7 1873 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 NLRC5Q86WI3 1866 aa15.21■□□□□ 0.03
USP46-209ENST00000514536 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.02
USP46-209ENST00000514536 F8W810 466 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 KCNE1P15382 129 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 PNOCQ13519 176 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
USP46-209ENST00000514536 NAB2Q15742 525 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 TIGD5Q53EQ6 642 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 TMC7Q7Z402 723 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
USP46-209ENST00000514536 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
USP46-209ENST00000514536 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 PAAF1Q9BRP4 392 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 PCIF1Q9H4Z3 704 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 NSUN3Q9H649 340 aaKnown RBP15.2■□□□□ 0.02
USP46-209ENST00000514536 PLEKHA5Q9HAU0 1116 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 MARCH5Q9NX47 278 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 CNTN3Q9P232 1028 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 CPSF3Q9UKF6 684 aaKnown RBP15.2■□□□□ 0.02
USP46-209ENST00000514536 KIAA1671Q9BY89 1806 aa15.2■□□□□ 0.02
USP46-209ENST00000514536 TTC26A0AVF1 554 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 LACTBL1A8MY62 500 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 FSCN2O14926 492 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 GARTP22102 1010 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 SPAG1Q07617 926 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 ENOX2Q16206 610 aaKnown RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 ARMCX5Q6P1M9 558 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 ZSWIM2Q8NEG5 633 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 SAAL1Q96ER3 474 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 TCF25Q9BQ70 676 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 GOLGA2P5Q9HBQ8 144 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 TADA2AO75478 443 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 RHOBTB3O94955 611 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 UBE2HP62256 183 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 PPP2R3AQ06190 1150 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 SOX4Q06945 474 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 PLPP4Q5VZY2 271 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 CRELD2Q6UXH1 353 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 KIAA0895Q8NCT3 520 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 ERCC4Q92889 916 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
USP46-209ENST00000514536 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 FAM213AQ9BRX8 229 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 PRDM6Q9NQX0 595 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 ENTPD7Q9NQZ7 604 aa15.19■□□□□ 0.02
USP46-209ENST00000514536 UBE4BO95155 1302 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms