RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 BLIDQ8IZY5 108 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CCHCR1Q8TD31 782 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 MAML3Q96JK9 1138 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 TINF2Q9BSI4 451 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 TSEN34Q9BSV6 310 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 DPH5Q9H2P9 285 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 PANK4Q9NVE7 773 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ANKFY1Q9P2R3 1169 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 BICDL2A1A5D9 508 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 O00370 1275 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 NDUFAB1O14561 156 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 GFPT2O94808 682 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 SHBGP04278 402 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 RPLP2P05387 115 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CYP3A4P08684 503 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ICAM3P32942 547 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 Q3C1V9 767 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 SLC9C1Q4G0N8 1177 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CFAP221Q4G0U5 840 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CCDC174Q6PII3 467 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 MTHFD1LQ6UB35 978 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 APLFQ8IW19 511 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 TCP11Q8WWU5 503 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 HAS1Q92839 578 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 ART4Q93070 314 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CAPZA3Q96KX2 299 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 EPB41L5Q9HCM4 733 aa7.98□□□□□ -1.13
CLIP1-205ENST00000514271 RPL26L1Q9UNX3 145 aaKnown RBP7.98□□□□□ -1.13
CLIP1-205ENST00000514271 CYP3A7-CYP3A51PA0A087WV96 503 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CAPNS1P04632 268 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CYP3A7P24462 503 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 ALDH5A1P51649 535 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 NAPAP54920 295 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 BRDTQ58F21 947 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TTC19Q6DKK2 380 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SPDYE1Q8NFV5 336 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 AGAP11Q8TF27 550 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 GPRASP2Q96D09 838 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CRACR2AQ9BSW2 395 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 PORCNQ9H237 461 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SPC25Q9HBM1 224 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 JADE2Q9NQC1 790 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 STK17AQ9UEE5 414 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TRPC6Q9Y210 931 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SPDYE3A6NKU9 549 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CCDC188H7C350 402 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 FAM163BP0C2L3 166 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 AKR1A1P14550 325 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CST5P28325 142 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SLC8A1P32418 973 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 PRKCZQ05513 592 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 STXBP2Q15833 593 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TBC1D25Q3MII6 688 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 PCNX4Q63HM2 1172 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CPXCR1Q8N123 301 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 METTL13Q8N6R0 699 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 PHC3Q8NDX5 983 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 EMID1Q96A84 441 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 FAM210AQ96ND0 272 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 UPF3AQ9H1J1 476 aaKnown RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 PSTPIP2Q9H939 334 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 ERVK-5Q9HDB9 667 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 HSF2BPO75031 334 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TACC1O75410 805 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 CABYRO75952 493 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 MUTP22033 750 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SLC16A2P36021 539 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 TUBP50607 506 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 KIF5AQ12840 1032 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 MPP2Q14168 576 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 EDRF1Q3B7T1 1238 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 LNX1Q8TBB1 728 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SYTL5Q8TDW5 730 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 LMBR1Q8WVP7 490 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 STAMQ92783 540 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SLC7A6OSQ96CW6 309 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 ZNF333Q96JL9 665 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 V9GY48 417 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-205ENST00000514271 ADGRA3Q8IWK6 1321 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 IGSF9BQ9UPX0 1349 aa7.97□□□□□ -1.13
CLIP1-205ENST00000514271 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 SEPT4O43236 478 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 AHCYL1O43865 530 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 PEX11AO75192 247 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 GOLGA8HP0CJ92 632 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 PDE4DQ08499 809 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 RASA2Q15283 850 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 ANO7Q6IWH7 933 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 C8orf74Q6P047 294 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 MICALCLQ6ZW33 695 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 ARRDC4Q8NCT1 418 aa7.96□□□□□ -1.13
CLIP1-205ENST00000514271 N4BP2L2Q92802 583 aaPredicted RBP7.96□□□□□ -1.13
CLIP1-205ENST00000514271 HVCN1Q96D96 273 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms