RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 GINS2Q9Y248 185 aa10.15□□□□□ -0.78
DHFR-206ENST00000513048 COQ4Q9Y3A0 265 aa10.15□□□□□ -0.78
DHFR-206ENST00000513048 STX10O60499 249 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 N4BP1O75113 896 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 CAND2O75155 1236 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 LRRN2O75325 713 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 SGPL1O95470 568 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 CD4P01730 458 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 C4BPAP04003 597 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 CLTAP09496 248 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 CTSHP09668 335 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 STAG3L1P0CL83 205 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 COL6A1P12109 1028 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 THPOP40225 353 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 GRM5P41594 1212 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.79
DHFR-206ENST00000513048 MXI1P50539 228 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 ZACNQ401N2 412 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 FBXO47Q5MNV8 452 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 KLHDC7AQ5VTJ3 777 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 SEMA4DQ92854 862 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 CCDC51Q96ER9 411 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 CGRRF1Q99675 332 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 NAA15Q9BXJ9 866 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 EIF2AQ9BY44 585 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 AGO3Q9H9G7 860 aaKnown RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 TMEM8AQ9HCN3 771 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 FAM207AQ9NSI2 230 aaPredicted RBP10.14□□□□□ -0.79
DHFR-206ENST00000513048 GCNT4Q9P109 453 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 FBXL5Q9UKA1 691 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 RALGAPA2Q2PPJ7 1873 aa10.14□□□□□ -0.79
DHFR-206ENST00000513048 M0QZ92 97 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 VNN1O95497 513 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 NPTXRO95502 500 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 CXCL8P10145 99 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 DLATP10515 647 aaKnown RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 CKBP12277 381 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 HNRNPH3P31942 346 aaKnown RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 KRT9P35527 623 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 OSTNP61366 133 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 ZBED6P86452 979 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 DSC3Q14574 896 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 LPIN1Q14693 890 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 KYAT1Q16773 422 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 SLC10A6Q3KNW5 377 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 ZNF618Q5T7W0 954 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 TDRD10Q5VZ19 366 aaKnown RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 KRT39Q6A163 491 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 SCARA3Q6AZY7 606 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 NOTUMQ6P988 496 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 WDR59Q6PJI9 974 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 CNGA4Q8IV77 575 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 EFCAB13Q8IY85 973 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 NEK11Q8NG66 645 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 TRIM44Q96DX7 344 aaPredicted RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 ABHD10Q9NUJ1 306 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 CEP72Q9P209 647 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 PYCARDQ9ULZ3 195 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 ZKSCAN5Q9Y2L8 839 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 LUC7L2Q9Y383 392 aaKnown RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 FHOD1Q9Y613 1164 aa10.13□□□□□ -0.79
DHFR-206ENST00000513048 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
DHFR-206ENST00000513048 CITO14578 2027 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 LACTBL1A8MY62 500 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 RPS6KA5O75582 802 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 IL18RAPO95256 599 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 UCHL3P15374 230 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 TRIM21P19474 475 aaKnown RBP10.12□□□□□ -0.79
DHFR-206ENST00000513048 GJA8P48165 433 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 JAM2P57087 298 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 POLR2FP61218 127 aaKnown RBP10.12□□□□□ -0.79
DHFR-206ENST00000513048 SURF1Q15526 300 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 MEA1Q16626 185 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 LMBRD2Q68DH5 695 aaPredicted RBP10.12□□□□□ -0.79
DHFR-206ENST00000513048 IQCEQ6IPM2 695 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 PHLDB3Q6NSJ2 640 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 GJB7Q6PEY0 223 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 USP37Q86T82 979 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 WDR49Q8IV35 697 aa10.12□□□□□ -0.79
DHFR-206ENST00000513048 SMG8Q8ND04 991 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms