RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CHMP4CQ96CF2 233 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 LSM14BQ9BX40 385 aaKnown RBP4.23□□□□□ -1.73
CHD1-207ENST00000511628 CPEB1Q9BZB8 566 aaKnown RBP4.23□□□□□ -1.73
CHD1-207ENST00000511628 SENP6Q9GZR1 1112 aaPredicted RBP4.23□□□□□ -1.73
CHD1-207ENST00000511628 GPRC5BQ9NZH0 403 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 ZIM2Q9NZV7 527 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 FZD1Q9UP38 647 aa4.23□□□□□ -1.73
CHD1-207ENST00000511628 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 PRPF3O43395 683 aaKnown RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 TSPAN6O43657 245 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 ABLIM3O94929 683 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 NDUFA10O95299 355 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 RAP2AP10114 183 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 SRSF2Q01130 221 aaKnown RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 PPP2R5AQ15172 486 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 MUM1Q2TAK8 710 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 RRP12Q5JTH9 1297 aaKnown RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 ATXN7L2Q5T6C5 722 aaPredicted RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 SLC41A1Q8IVJ1 513 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 PQLC1Q8N2U9 271 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 LCORLQ8N3X6 602 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 FBXO18Q8NFZ0 1043 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 LENG9Q96B70 501 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 FAXDC2Q96IV6 333 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 SLC46A2Q9BY10 475 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 CDH19Q9H159 772 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 IKZF4Q9H2S9 585 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 GREM2Q9H772 168 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 AASDHPPTQ9NRN7 309 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 RBM12Q9NTZ6 932 aaKnown RBP4.22□□□□□ -1.73
CHD1-207ENST00000511628 MOCS1Q9NZB8 636 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 DNM3Q9UQ16 869 aa4.22□□□□□ -1.73
CHD1-207ENST00000511628 DIRC3C9JPN6 131 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 ADCY6O43306 1168 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 OSMP13725 252 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 IL2RBP14784 551 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 GSPT1P15170 499 aaKnown RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 FLT3LGP49771 235 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 USP14P54578 494 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 INHBEP58166 350 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 CLRN1P58418 232 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 ANKS6Q68DC2 871 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 PGM2L1Q6PCE3 622 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 DRICH1Q6PGQ1 229 aaPredicted RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 LRRC55Q6ZSA7 311 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 NOL8Q76FK4 1167 aaKnown RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 ZNF627Q7L945 461 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 MRGPREQ86SM8 312 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 PLXDC1Q8IUK5 500 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 WDR75Q8IWA0 830 aaKnown RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.21□□□□□ -1.74
CHD1-207ENST00000511628 SUPT20HQ8NEM7 779 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 REPS2Q8NFH8 660 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 OR7D4Q8NG98 312 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 RHOBTB2Q9BYZ6 727 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 BCO1Q9HAY6 547 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 AKIP1Q9NQ31 210 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 LANCL2Q9NS86 450 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 CCM2LQ9NUG4 571 aaPredicted RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 TMEM140Q9NV12 185 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 TCEAL9Q9UHQ7 104 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 ATP11BQ9Y2G3 1177 aa4.21□□□□□ -1.74
CHD1-207ENST00000511628 USP15Q9Y4E8 981 aaPredicted RBP4.21□□□□□ -1.74
CHD1-207ENST00000511628 GAGE12BA1L429 117 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 LEFTY2O00292 366 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 NCR1O76036 304 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ENDOD1O94919 500 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 RHOBTB3O94955 611 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 MALLQ13021 153 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ADRM1Q16186 407 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ATP2B3Q16720 1220 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 BMT2Q1RMZ1 405 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 MST1LQ2TV78 715 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ANO4Q32M45 955 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 FAM47AQ5JRC9 791 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 MFSD14BQ5SR56 506 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 MBNL2Q5VZF2 373 aaKnown RBP4.2□□□□□ -1.74
CHD1-207ENST00000511628 C14orf80Q86SX3 495 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ULK2Q8IYT8 1036 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 TSPEARQ8WU66 669 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 STON2Q8WXE9 905 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 CAVIN3Q969G5 261 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ZG16BQ96DA0 208 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 CEP95Q96GE4 821 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ORAI2Q96SN7 254 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 SLC13A1Q9BZW2 595 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ZNF768Q9H5H4 540 aaKnown RBP4.2□□□□□ -1.74
CHD1-207ENST00000511628 LDAHQ9H6V9 325 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 DMRT3Q9NQL9 472 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 RNF181Q9P0P0 153 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 ANKFY1Q9P2R3 1169 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 IP6K2Q9UHH9 426 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 SAP30BPQ9UHR5 308 aaKnown RBP4.2□□□□□ -1.74
CHD1-207ENST00000511628 NOB1Q9ULX3 412 aaKnown RBP4.2□□□□□ -1.74
CHD1-207ENST00000511628 LUC7L2Q9Y383 392 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms