RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 MRPL4Q9BYD3 311 aaKnown RBP29.29■■■□□ 2.28
SNF8-208ENST00000510195 PTPRHQ9HD43 1115 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 TOPORSQ9NS56 1045 aaPredicted RBP29.29■■■□□ 2.28
SNF8-208ENST00000510195 SMC3Q9UQE7 1217 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 TMEM189-UBE2V1I3L0A0 370 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 SLC26A4O43511 780 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 KIF4AO95239 1232 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 MAPK7Q13164 816 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 RTP2Q5QGT7 225 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 KCNK18Q7Z418 384 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 FEZF2Q8TBJ5 459 aa29.28■■■□□ 2.28
SNF8-208ENST00000510195 PPP1R10Q96QC0 940 aaKnown RBP29.28■■■□□ 2.28
SNF8-208ENST00000510195 ASGR2P07307 311 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 GRM5P41594 1212 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 YARSP54577 528 aaKnown RBP29.27■■■□□ 2.28
SNF8-208ENST00000510195 FAM171A1Q5VUB5 890 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 DCLRE1AQ6PJP8 1040 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 SYT2Q8N9I0 419 aaPredicted RBP29.27■■■□□ 2.28
SNF8-208ENST00000510195 SPIRE2Q8WWL2 714 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 AK8Q96MA6 479 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 TBC1D32Q96NH3 1257 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 CCDC94Q9BW85 323 aaPredicted RBP29.27■■■□□ 2.28
SNF8-208ENST00000510195 CXCL16Q9H2A7 254 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 CACNG4Q9UBN1 327 aa29.27■■■□□ 2.28
SNF8-208ENST00000510195 RFPL2O75678 378 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 AVPR2P30518 371 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 PTPN5P54829 565 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 XKR4Q5GH76 650 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 LNX1Q8TBB1 728 aaPredicted RBP29.26■■■□□ 2.27
SNF8-208ENST00000510195 HASPINQ8TF76 798 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 SMG7Q92540 1137 aaKnown RBP29.26■■■□□ 2.27
SNF8-208ENST00000510195 ZNF707Q96C28 371 aaPredicted RBP29.26■■■□□ 2.27
SNF8-208ENST00000510195 IGSF9Q9P2J2 1179 aa29.26■■■□□ 2.27
SNF8-208ENST00000510195 CLUHO75153 1309 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 VWA3AA6NCI4 1184 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 SPATA31D3P0C874 917 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 MCF2P10911 925 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 SMTNP53814 917 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 IER5LQ5T953 404 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 LARP1BQ659C4 914 aaKnown RBP29.25■■■□□ 2.27
SNF8-208ENST00000510195 ALKAL1Q6UXT8 129 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.25■■■□□ 2.27
SNF8-208ENST00000510195 SPATA31D4Q6ZUB0 917 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 TAS1R3Q7RTX0 852 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 CDK5RAP3Q96JB5 506 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 CLSTN3Q9BQT9 956 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 PRKD2Q9BZL6 878 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 CDT1Q9H211 546 aa29.25■■■□□ 2.27
SNF8-208ENST00000510195 TRAPPC3O43617 180 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 ZMYND10O75800 440 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 RPL17P18621 184 aaKnown RBP29.24■■■□□ 2.27
SNF8-208ENST00000510195 PROZP22891 400 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 TDGQ13569 410 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 PSMD5Q16401 504 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 ZNF568Q3ZCX4 644 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 PRSS55Q6UWB4 352 aaPredicted RBP29.24■■■□□ 2.27
SNF8-208ENST00000510195 CEP57Q86XR8 500 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 PNMA5Q96PV4 448 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 SLC38A7Q9NVC3 462 aa29.24■■■□□ 2.27
SNF8-208ENST00000510195 KMT2EQ8IZD2 1858 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 SMIM28A0A1B0GU29 152 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 BMP15O95972 392 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 PLS3P13797 630 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 SLC12A3P55017 1021 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 STRN3Q13033 797 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 ZRSR1Q15695 479 aaKnown RBP29.23■■■□□ 2.27
SNF8-208ENST00000510195 UPP1Q16831 310 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 GLYCTKQ8IVS8 523 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 PRSS33Q8NF86 280 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 NXPE3Q969Y0 559 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 DDX27Q96GQ7 796 aaKnown RBP29.23■■■□□ 2.27
SNF8-208ENST00000510195 TARS2Q9BW92 718 aaKnown RBP29.23■■■□□ 2.27
SNF8-208ENST00000510195 IRF2BPLQ9H1B7 796 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 KCNK12Q9HB15 430 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 PIDD1Q9HB75 910 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.23■■■□□ 2.27
SNF8-208ENST00000510195 EPS15L1Q9UBC2 864 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 FBXW11Q9UKB1 542 aa29.23■■■□□ 2.27
SNF8-208ENST00000510195 TRIP11Q15643 1979 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 B3GAT3O94766 335 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 FGFR3P22607 806 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 CLCNKBP51801 687 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 GLRA4Q5JXX5 417 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 MPZL3Q6UWV2 235 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 RTL10Q7L3V2 364 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 BRAPQ7Z569 592 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 ACAP3Q96P50 834 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 TCHPQ9BT92 498 aa29.22■■■□□ 2.27
SNF8-208ENST00000510195 SFI1A8K8P3 1242 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 H0YCG3 227 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 SLC16A4O15374 487 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 HNRNPA1P09651 372 aaKnown RBP eCLIP29.21■■■□□ 2.27
SNF8-208ENST00000510195 PLA2G4BP0C869 781 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 TMEM119Q4V9L6 283 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 TMEM161BQ8NDZ6 487 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 KCNN1Q92952 543 aa29.21■■■□□ 2.27
SNF8-208ENST00000510195 LARSQ9P2J5 1176 aaKnown RBP29.21■■■□□ 2.27
SNF8-208ENST00000510195 ABLIM1O14639 778 aa29.2■■■□□ 2.26
SNF8-208ENST00000510195 N4BP1O75113 896 aaKnown RBP29.2■■■□□ 2.26
SNF8-208ENST00000510195 TOM1L1O75674 476 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms