RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 ZIM3Q96PE6 472 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 IWS1Q96ST2 819 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 SH3GL2Q99962 352 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 CBWD1Q9BRT8 395 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 PDGFDQ9GZP0 370 aaPredicted RBP8.09□□□□□ -1.11
CAST-228ENST00000509903 KIAA1683Q9H0B3 1180 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 TAF1DQ9H5J8 278 aaPredicted RBP8.09□□□□□ -1.11
CAST-228ENST00000509903 SLC38A10Q9HBR0 1119 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 UBE2TQ9NPD8 197 aaPredicted RBP8.09□□□□□ -1.11
CAST-228ENST00000509903 OSGEPQ9NPF4 335 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 RAB6BQ9NRW1 208 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 MAP3K20Q9NYL2 800 aaKnown RBP8.09□□□□□ -1.11
CAST-228ENST00000509903 KLK14Q9P0G3 267 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 PCDH10Q9P2E7 1040 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 PGAP2Q9UHJ9 254 aa8.09□□□□□ -1.11
CAST-228ENST00000509903 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 WDR64B1ANS9 1081 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 TISP43B9A030 160 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FOXN3O00409 490 aaPredicted RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 P4HA2O15460 535 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 BUB1BO60566 1050 aaPredicted RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 ZBED4O75132 1171 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 CLSTN1O94985 981 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 LYPLA2O95372 231 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FAM153BP0C7A2 387 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 GCLMP48507 274 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 JAK3P52333 1124 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PEX3P56589 373 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PSMC5P62195 406 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 DLG4P78352 724 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 GHRHRQ02643 423 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 CUL1Q13616 776 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PGM5Q15124 567 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FAM153CQ494X1 144 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FAM102BQ5T8I3 360 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 NSMFQ6X4W1 530 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 MREGQ8N565 214 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SAMD3Q8N6K7 520 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 HES6Q96HZ4 224 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 TAAR1Q96RJ0 339 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SRPK1Q96SB4 655 aaKnown RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 RMDN3Q96TC7 470 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SH2D3AQ9BRG2 576 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 TIPINQ9BVW5 301 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 DDX47Q9H0S4 455 aaKnown RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 HSPBP1Q9NZL4 362 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FAM153AQ9UHL3 310 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PNMA2Q9UL42 364 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PPP1R9AQ9ULJ8 1098 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 FAM170AA1A519 330 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 BACH1O14867 736 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SLC16A4O15374 487 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 VCAM1P19320 739 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 KCNA3P22001 575 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SFNP31947 248 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 USP8P40818 1118 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 MXI1P50539 228 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SMTNP53814 917 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 KRT76Q01546 638 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PPP3CAQ08209 521 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 PRPF4BQ13523 1007 aaKnown RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 DGKZQ13574 1117 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 KIF22Q14807 665 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 XKR9Q5GH70 373 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 RNF187Q5TA31 235 aaPredicted RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 ALKBH2Q6NS38 261 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 MAATS1Q7Z4T9 603 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 C12orf56Q8IXR9 622 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 C4orf19Q8IY42 314 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 RASGEF1CQ8N431 466 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 ZNF511Q8NB15 262 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SLC17A8Q8NDX2 589 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 CCDC26Q8TAB7 109 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 TRERF1Q96PN7 1200 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 AGPAT1Q99943 283 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 SYT11Q9BT88 431 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 CAPS2Q9BXY5 557 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 THAP2Q9H0W7 228 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 ISCUQ9H1K1 167 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 EXOC7Q9UPT5 735 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 BCS1LQ9Y276 419 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 STXBP5LQ9Y2K9 1186 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 ASTN2O75129 1339 aaPredicted RBP8.08□□□□□ -1.12
CAST-228ENST00000509903 IGSF9BQ9UPX0 1349 aa8.08□□□□□ -1.12
CAST-228ENST00000509903 TMEM150BA6NC51 233 aa8.07□□□□□ -1.12
CAST-228ENST00000509903 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
CAST-228ENST00000509903 CTNND1O60716 968 aaKnown RBP8.07□□□□□ -1.12
CAST-228ENST00000509903 KRT14P02533 472 aa8.07□□□□□ -1.12
CAST-228ENST00000509903 FGGP02679 453 aa8.07□□□□□ -1.12
CAST-228ENST00000509903 INHAP05111 366 aa8.07□□□□□ -1.12
CAST-228ENST00000509903 SNRPFP62306 86 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms