RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGB6Q9Y5F9 930 aa4.97□□□□□ -1.61
SMARCA5-202ENST00000508573 ZNF891A8MT65 544 aaPredicted RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 RASA4BC9J798 803 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 PLSCR1O15162 318 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 RASA4O43374 803 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 HRGP04196 525 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 CHGBP05060 677 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 SCNN1BP51168 640 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 COPAP53621 1224 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 PPP2R5CQ13362 524 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 HSP90AA2PQ14568 343 aaPredicted RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 GLIPR1L2Q4G1C9 344 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 AGBL4Q5VU57 503 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 PGM2L1Q6PCE3 622 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 C4orf50Q6ZRC1 276 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 USP53Q70EK8 1073 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 SRGAP1Q7Z6B7 1085 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 ANKRD18AQ8IVF6 992 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 NXPE1Q8N323 547 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 LSM14AQ8ND56 463 aaKnown RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 ADAMTS18Q8TE60 1221 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 KCTD13Q8WZ19 329 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 TRIM63Q969Q1 353 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 SNX21Q969T3 373 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 ATP6V1E2Q96A05 226 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 SEC62Q99442 399 aaKnown RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 AARSD1Q9BTE6 412 aaKnown RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 UNC45AQ9H3U1 944 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 GPR27Q9NS67 375 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 IFT80Q9P2H3 777 aaPredicted RBP4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 C11orf21Q9P2W6 132 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 ZNF112Q9UJU3 913 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 CDC23Q9UJX2 597 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 POLHQ9Y253 713 aa4.96□□□□□ -1.62
SMARCA5-202ENST00000508573 GOLGA6L6A8MZA4 724 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 H0Y858 1186 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 AGRPO00253 132 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PRODHO43272 600 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 CAPNS1P04632 268 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ZNF888P0CJ79 500 aaPredicted RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PABPC1P11940 636 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 IDEP14735 1019 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 VCAM1P19320 739 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 SMARCA1P28370 1054 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PPM1AP35813 382 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 IGFALSP35858 605 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PSMC1P62191 440 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 BTKQ06187 659 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 MTA1Q13330 715 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 SEMA5AQ13591 1074 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 NOLC1Q14978 699 aaKnown RBP eCLIP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PRR16Q569H4 304 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ITPRIPL1Q6GPH6 555 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 RNF207Q6ZRF8 634 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PDZD4Q76G19 769 aaPredicted RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 BRSK2Q8IWQ3 736 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ARL6IP6Q8N6S5 226 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ZBTB34Q8NCN2 500 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ZNF503Q96F45 646 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 NEIL1Q96FI4 390 aaPredicted RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 AHCYL2Q96HN2 611 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ACO2Q99798 780 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 NUDT16L1Q9BRJ7 211 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 CHCHD6Q9BRQ6 235 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 TACO1Q9BSH4 297 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 PHF20Q9BVI0 1012 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 APOL5Q9BWW9 433 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 ELAC1Q9H777 363 aaKnown RBP4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 VPS45Q9NRW7 570 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 HELLSQ9NRZ9 838 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 KCND1Q9NSA2 647 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 GGA3Q9NZ52 723 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 MAFFQ9ULX9 164 aa4.95□□□□□ -1.62
SMARCA5-202ENST00000508573 TCRBV16S1A1N1A0A5B0 115 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 ANKRD18BA2A2Z9 1011 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TSPY2A6NKD2 308 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 B4E171 279 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 NKRFO15226 690 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TMEM127O75204 238 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 FKBP9O95302 570 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 IL18BPO95998 194 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TSPY3P0CV98 308 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TSPY8P0CW00 308 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 FGFR1P11362 822 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 GNAT1P11488 350 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 MTHFD1P11586 935 aaKnown RBP4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 ABCB4P21439 1286 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 COMTP21964 271 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 PEX19P40855 299 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 KRT85P78386 507 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 DGCR2P98153 550 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TSPY1Q01534 308 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 TNFAIP2Q03169 654 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
SMARCA5-202ENST00000508573 SPIRE1Q08AE8 756 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms