RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 AGO2Q9UKV8 859 aaKnown RBP16.36■□□□□ 0.21
RNF4-210ENST00000508235 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
RNF4-210ENST00000508235 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 GOLGA6L22H0YM25 854 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 PTGESO14684 152 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 GRM6O15303 877 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 GADD45BO75293 160 aaPredicted RBP16.35■□□□□ 0.21
RNF4-210ENST00000508235 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 SMC2O95347 1197 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 KCNE1P15382 129 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 PPP2R3AQ06190 1150 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 BMT2Q1RMZ1 405 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 TIGD5Q53EQ6 642 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 ARMCX5Q6P1M9 558 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 ALKAL1Q6UXT8 129 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 HS2ST1Q7LGA3 356 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 SPPL3Q8TCT6 385 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 GSDMAQ96QA5 445 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 COLEC11Q9BWP8 271 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
RNF4-210ENST00000508235 HAPLN2Q9GZV7 340 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 ALG13Q9NP73 1137 aaKnown RBP16.35■□□□□ 0.21
RNF4-210ENST00000508235 CNTN3Q9P232 1028 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 DNAJB4Q9UDY4 337 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 MTCH2Q9Y6C9 303 aa16.35■□□□□ 0.21
RNF4-210ENST00000508235 LAMA2P24043 3122 aaKnown RBP16.35■□□□□ 0.21
RNF4-210ENST00000508235 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 NRP1O14786 923 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 PBX3P40426 434 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 OR1G1P47890 313 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 SLC11A1P49279 550 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 KNOP1Q1ED39 458 aaKnown RBP16.34■□□□□ 0.21
RNF4-210ENST00000508235 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 GLIS3Q8NEA6 775 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 PPP2R3CQ969Q6 453 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 IGSF21Q96ID5 467 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 UROC1Q96N76 676 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 TLR9Q9NR96 1032 aa16.34■□□□□ 0.21
RNF4-210ENST00000508235 CPSF3Q9UKF6 684 aaKnown RBP16.34■□□□□ 0.21
RNF4-210ENST00000508235 NT5C1B-RDH14C9J2C7 533 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 XPOTO43592 962 aaKnown RBP16.33■□□□□ 0.2
RNF4-210ENST00000508235 FAM189A1O60320 539 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 CXCL8P10145 99 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 ADSSP30520 456 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 STK4Q13043 487 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 PNOCQ13519 176 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 SEZ6Q53EL9 994 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 GLRA4Q5JXX5 417 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.2
RNF4-210ENST00000508235 MAFAQ8NHW3 353 aaPredicted RBP16.33■□□□□ 0.2
RNF4-210ENST00000508235 SMARCE1Q969G3 411 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 PPP1R10Q96QC0 940 aaKnown RBP16.33■□□□□ 0.2
RNF4-210ENST00000508235 KIAA1586Q9HCI6 787 aa16.33■□□□□ 0.2
RNF4-210ENST00000508235 TTC26A0AVF1 554 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 TISP43B9A030 160 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 B4GALT3O60512 393 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 ADRB2P07550 413 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 TNFSF9P41273 254 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 ACOT2P49753 483 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 KIAA0895Q8NCT3 520 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
RNF4-210ENST00000508235 NSUN3Q9H649 340 aaKnown RBP16.32■□□□□ 0.2
RNF4-210ENST00000508235 ASB7Q9H672 318 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 DERAQ9Y315 318 aa16.32■□□□□ 0.2
RNF4-210ENST00000508235 ATG2AQ2TAZ0 1938 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 CASTOR2A6NHX0 329 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 EXTL3O43909 919 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 IL18RAPO95256 599 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 HOXD13P35453 343 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 NAB2Q15742 525 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
RNF4-210ENST00000508235 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 CBWD1Q9BRT8 395 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
RNF4-210ENST00000508235 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 UBQLN1Q9UMX0 589 aaKnown RBP16.31■□□□□ 0.2
RNF4-210ENST00000508235 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 PRG3Q9Y2Y8 225 aaPredicted RBP16.31■□□□□ 0.2
RNF4-210ENST00000508235 PCDHA5Q9Y5H7 936 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 ANK1P16157 1881 aa16.31■□□□□ 0.2
RNF4-210ENST00000508235 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 LACTBL1A8MY62 500 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 NCK2O43639 380 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 TADA2AO75478 443 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 DNAJB1P25685 340 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 RPL9P32969 192 aaKnown RBP16.3■□□□□ 0.2
RNF4-210ENST00000508235 ELAVL2Q12926 359 aaKnown RBP16.3■□□□□ 0.2
RNF4-210ENST00000508235 CAMK1Q14012 370 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms