RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BHMT2Q9H2M3 363 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 ATP6V0A4Q9HBG4 840 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 KMT5AQ9NQR1 393 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 CALCOCO1Q9P1Z2 691 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 NCDNQ9UBB6 729 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
LSM6-205ENST00000507449 OAZ3Q9UMX2 235 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 FAM50BQ9Y247 325 aa4.41□□□□□ -1.7
LSM6-205ENST00000507449 A0A088AWK7 358 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 NRP1O14786 923 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SASH1O94885 1247 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SLC5A1P13866 664 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 TYRP14679 529 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 IL12RB1P42701 662 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 EPHB4P54760 987 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RHBDL3P58872 404 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 CTXN1P60606 82 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RAC3P60763 192 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 PPP2CBP62714 309 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RAB1AP62820 205 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 PPP2CAP67775 309 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 APBA1Q02410 837 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SP140Q13342 867 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 MRPL49Q13405 166 aaKnown RBP4.4□□□□□ -1.71
LSM6-205ENST00000507449 PLS1Q14651 629 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RAB39AQ14964 217 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 CNN3Q15417 329 aaKnown RBP4.4□□□□□ -1.71
LSM6-205ENST00000507449 ZNF568Q3ZCX4 644 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 AFMIDQ63HM1 303 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 ANKS6Q68DC2 871 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 BORAQ6PGQ7 559 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RSPH3Q86UC2 560 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
LSM6-205ENST00000507449 C3orf20Q8ND61 904 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 FEZF2Q8TBJ5 459 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 TTC17Q96AE7 1141 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 IL17RAQ96F46 866 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 KCNC2Q96PR1 638 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
LSM6-205ENST00000507449 MYOCQ99972 504 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 FAM204AQ9H8W3 233 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 ARMT1Q9H993 441 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 SEC61A2Q9H9S3 476 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 LMBRD1Q9NUN5 540 aa4.4□□□□□ -1.71
LSM6-205ENST00000507449 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.71
LSM6-205ENST00000507449 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
LSM6-205ENST00000507449 F2RL2O00254 374 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 PMM2O15305 246 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 PEX14O75381 377 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 SBK3P0C264 359 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 CR2P20023 1033 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 FLT3LGP49771 235 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 GZMKP49863 264 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 NEK3P51956 506 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 SEMA5AQ13591 1074 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 SAFBQ15424 915 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM6-205ENST00000507449 FAM47AQ5JRC9 791 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 THEMIS2Q5TEJ8 643 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 IL31Q6EBC2 164 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 APOA5Q6Q788 366 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 ARHGEF18Q6ZSZ5 1173 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 CCDC149Q6ZUS6 474 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 MAEAQ7L5Y9 396 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 FRMD5Q7Z6J6 570 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 FAM90A1Q86YD7 464 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 PLXDC1Q8IUK5 500 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 CCAR1Q8IX12 1150 aaKnown RBP4.39□□□□□ -1.71
LSM6-205ENST00000507449 SP8Q8IXZ3 490 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 LGI4Q8N135 537 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 CDK5RAP3Q96JB5 506 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 GNRHR2Q96P88 292 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 LRRC37BQ96QE4 947 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 LMF1Q96S06 567 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 PLA2G12BQ9BX93 195 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 C22orf23Q9BZE7 217 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 C12orf65Q9H3J6 166 aaKnown RBP4.39□□□□□ -1.71
LSM6-205ENST00000507449 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
LSM6-205ENST00000507449 TMEM140Q9NV12 185 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 ABCF2Q9UG63 623 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 STAP2Q9UGK3 403 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 POLHQ9Y253 713 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 PCDHGB6Q9Y5F9 930 aa4.39□□□□□ -1.71
LSM6-205ENST00000507449 A0A1W2PRX2 142 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 ANO9A1A5B4 782 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 CAPN8A6NHC0 703 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 HOXA3O43365 443 aaPredicted RBP4.38□□□□□ -1.71
LSM6-205ENST00000507449 LAMTOR5O43504 91 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 CDC14BO60729 498 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 RPLP2P05387 115 aaKnown RBP4.38□□□□□ -1.71
LSM6-205ENST00000507449 IL2RBP14784 551 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PHKG2P15735 406 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 SLC6A4P31645 630 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 CNR2P34972 360 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 NPEPPSP55786 919 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 KIAA0753Q2KHM9 967 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms