RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LIG4P49917 911 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 NDUFA8P51970 172 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 RBM10P98175 930 aaKnown RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 SOX4Q06945 474 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 CUL4BQ13620 913 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 TMC7Q7Z402 723 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 APBB1IPQ7Z5R6 666 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 RNF168Q8IYW5 571 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 SNX27Q96L92 541 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 ACAP3Q96P50 834 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 CCDC94Q9BW85 323 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 UBE2ZQ9H832 354 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 A0A1W2PQ27 194 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 A0A1W2PQ64 194 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 A0A1W2PQD8 194 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 C2orf71A6NGG8 1288 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 CASTOR2A6NHX0 329 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 ADSSP30520 456 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 ASIC1P78348 528 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 EHHADHQ08426 723 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 ADAM15Q13444 863 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 TUSC3Q13454 348 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 CCDC65Q8IXS2 484 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 MRPL43Q8N983 215 aaKnown RBP19.5■□□□□ 0.71
SMN1-204ENST00000506163 VN1R2Q8NFZ6 395 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 ATXN2LQ8WWM7 1075 aaKnown RBP19.5■□□□□ 0.71
SMN1-204ENST00000506163 PAGE5Q96GU1 130 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 MAGEF1Q9HAY2 307 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 NGRNQ9NPE2 291 aaKnown RBP19.5■□□□□ 0.71
SMN1-204ENST00000506163 ENTPD7Q9NQZ7 604 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 COG5Q9UP83 839 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 STYXL1Q9Y6J8 313 aa19.5■□□□□ 0.71
SMN1-204ENST00000506163 PRPF6O94906 941 aaKnown RBP19.49■□□□□ 0.71
SMN1-204ENST00000506163 GCNT3O95395 438 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 GLP2RO95838 553 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 HOXD13P35453 343 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 KCNQ1P51787 676 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 AMPD3Q01432 767 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 L1TD1Q5T7N2 865 aaKnown RBP19.49■□□□□ 0.71
SMN1-204ENST00000506163 PDE12Q6L8Q7 609 aaKnown RBP19.49■□□□□ 0.71
SMN1-204ENST00000506163 CD300LGQ6UXG3 332 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 PABPC5Q96DU9 382 aaKnown RBP19.49■□□□□ 0.71
SMN1-204ENST00000506163 ASB2Q96Q27 587 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 GPR62Q9BZJ7 368 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 LRRC27Q9C0I9 530 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 TLE6Q9H808 572 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 GOLGA2P5Q9HBQ8 144 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 CLDND1Q9NY35 253 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 CITO14578 2027 aa19.49■□□□□ 0.71
SMN1-204ENST00000506163 KLRC4O43908 158 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 LILRB3O75022 631 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 CXCL14O95715 111 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 CXCL8P10145 99 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 CTSAP10619 480 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 KCNA5P22460 613 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 MATR3P43243 847 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMN1-204ENST00000506163 YARSP54577 528 aaKnown RBP19.48■□□□□ 0.71
SMN1-204ENST00000506163 KCNC3Q14003 757 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 DUSP6Q16828 381 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 C18orf25Q96B23 403 aaPredicted RBP19.48■□□□□ 0.71
SMN1-204ENST00000506163 CNTN3Q9P232 1028 aa19.48■□□□□ 0.71
SMN1-204ENST00000506163 TTC26A0AVF1 554 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 CARNS1A5YM72 827 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 H3BQ06 376 aaPredicted RBP19.47■□□□□ 0.71
SMN1-204ENST00000506163 TBX10O75333 385 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 CLTAP09496 248 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 BMP1P13497 986 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 KCNE1P15382 129 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 SYKP43405 635 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 MRPS5P82675 430 aaKnown RBP19.47■□□□□ 0.71
SMN1-204ENST00000506163 SPAG1Q07617 926 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 ENOX2Q16206 610 aaKnown RBP19.47■□□□□ 0.71
SMN1-204ENST00000506163 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 EFHBQ8N7U6 833 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 HASPINQ8TF76 798 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 HVCN1Q96D96 273 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 B3GALT6Q96L58 329 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 COLEC11Q9BWP8 271 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 TOPORSQ9NS56 1045 aaPredicted RBP19.47■□□□□ 0.71
SMN1-204ENST00000506163 CLEC1BQ9P126 229 aa19.47■□□□□ 0.71
SMN1-204ENST00000506163 OGTO15294 1046 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 KIF4AO95239 1232 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 SOD2P04179 222 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 ADRB2P07550 413 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 HSP90AA2PQ14568 343 aaPredicted RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 PTPN14Q15678 1187 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 CRELD2Q6UXH1 353 aaPredicted RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 EP400NLQ6ZTU2 488 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 EPM2AIP1Q7L775 607 aaPredicted RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 CEP57L1Q8IYX8 460 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 ACCSQ96QU6 501 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 PYM1Q9BRP8 204 aaKnown RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 MSTO1Q9BUK6 570 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 CPSF3Q9UKF6 684 aaKnown RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 ADAM28Q9UKQ2 775 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms