RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 HK3P52790 923 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 DSC2Q02487 901 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 ICA1Q05084 483 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CD276Q5ZPR3 534 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 PGBD2Q6P3X8 592 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 TLDC1Q6P9B6 456 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CCDC174Q6PII3 467 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CRIP3Q6Q6R5 217 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 LDHAL6AQ6ZMR3 332 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 Q8N1X5 172 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 NME8Q8N427 588 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 C3orf20Q8ND61 904 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 DPF2Q92785 391 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 KAT5Q92993 513 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 TBATAQ96M53 351 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 UNKQ9C0B0 810 aaKnown RBP4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 MYLK2Q9H1R3 596 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZNF287Q9HBT7 754 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 PNPLA8Q9NP80 782 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 C9orf78Q9NZ63 289 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CORO2BQ9UQ03 480 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 DUSP10Q9Y6W6 482 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 PMF1-BGLAPU3KQ54 211 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 A0A1W2PPL8 197 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 SH3D21A4FU49 640 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 H3BUI4 141 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 MPIG6BO95866 241 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 IL6STP40189 918 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZNF543Q08ER8 600 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 NOGQ13253 232 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 NOMO1Q15155 1222 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 LMBR1LQ6UX01 489 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 GAREM2Q75VX8 874 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 GPR155Q7Z3F1 870 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 BMP8AQ7Z5Y6 402 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 FAM126BQ8IXS8 530 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 IGDCC4Q8TDY8 1250 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 NSUN6Q8TEA1 469 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 SH3RF3Q8TEJ3 882 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 FNIP1Q8TF40 1166 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 ANKS1AQ92625 1134 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 BTBD2Q9BX70 525 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 LMBRD1Q9NUN5 540 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 OGDHLQ9ULD0 1010 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 PCDHA13Q9Y5I0 950 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 HCFC2Q9Y5Z7 792 aa4.67□□□□□ -1.66
TRAPPC13-208ENST00000505553 A0A087WV62 115 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 A0A1B0GTL3 188 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZNF839A8K0R7 811 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ADAMTS3O15072 1205 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 NOBOXO60393 691 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAFO75444 373 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ENDOD1O94919 500 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ATF2P15336 505 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 BDNFP23560 247 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAPK10P53779 464 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CDC42EP1Q00587 391 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 PPP3CAQ08209 521 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAP3K12Q12852 859 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 BLMHQ13867 455 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 PUM3Q15397 648 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 TUBB8Q3ZCM7 444 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CCDC38Q502W7 563 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 RHOT1Q8IXI2 618 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 SYTL1Q8IYJ3 562 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ADGRG2Q8IZP9 1017 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 GPR156Q8NFN8 814 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 PLBD2Q8NHP8 589 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ALG3Q92685 438 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 DDX11Q96FC9 970 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 TSPAN17Q96FV3 270 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 SLC35A4Q96G79 324 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 LTV1Q96GA3 475 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 TMEM41AQ96HV5 264 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 SUCLG2Q96I99 432 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CDC5LQ99459 802 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 COLEC11Q9BWP8 271 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 AMNQ9BXJ7 453 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 OR10A5Q9H207 317 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MANSC1Q9H8J5 431 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ARMT1Q9H993 441 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 AS3MTQ9HBK9 375 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 SLC39A2Q9NP94 309 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CNNM1Q9NRU3 951 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 TDP1Q9NUW8 608 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAP3K20Q9NYL2 800 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CDC23Q9UJX2 597 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAGED2Q9UNF1 606 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 PCDHB1Q9Y5F3 818 aa4.66□□□□□ -1.66
TRAPPC13-208ENST00000505553 POM121BA6NF01 834 aa4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 PRRT4C9JH25 899 aa4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 NCK2O43639 380 aa4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 PHF2O75151 1096 aa4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 FGF18O76093 207 aa4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 SEC24DO94855 1032 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC13-208ENST00000505553 IL18RAPO95256 599 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms