RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 STK38LQ9Y2H1 464 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
UBE3D-206ENST00000505226 BRAFP15056 766 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 CYP11B1P15538 503 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 VPS41P49754 854 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 VPS72Q15906 364 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 SLCO2A1Q92959 643 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 KLHL29Q96CT2 875 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
UBE3D-206ENST00000505226 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 SUN1O94901 812 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 NAA25Q14CX7 972 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 C2CD6Q53TS8 623 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 SHC3Q92529 594 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 UTP4Q969X6 686 aaKnown RBP12.71□□□□□ -0.37
UBE3D-206ENST00000505226 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
UBE3D-206ENST00000505226 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 MAB21L3Q8N8X9 362 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 HELQQ8TDG4 1101 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 MORC4Q8TE76 937 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.38
UBE3D-206ENST00000505226 ADAM22Q9P0K1 906 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 NAALADL1Q9UQQ1 740 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 ARL2BPQ9Y2Y0 163 aa12.71□□□□□ -0.38
UBE3D-206ENST00000505226 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ADSSP30520 456 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 RBM5P52756 815 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 MYBPC2Q14324 1141 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 TRMT1LQ7Z2T5 733 aaKnown RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ANKS1BQ7Z6G8 1248 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 IDI2Q9BXS1 227 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 RXFP1Q9HBX9 757 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 GPRC5CQ9NQ84 441 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 TOPORSQ9NS56 1045 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ITIH2P19823 946 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 MSH2P43246 934 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 MXI1P50539 228 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 SRRM1Q8IYB3 904 aaKnown RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 XXYLT1Q8NBI6 393 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 NRXN2Q9P2S2 1712 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 IPO5O00410 1097 aaKnown RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 ITGB5P18084 799 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 TAC1P20366 129 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 SPP2Q13103 211 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
UBE3D-206ENST00000505226 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 SNF8Q96H20 258 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 HEMGNQ9BXL5 484 aa12.7□□□□□ -0.38
UBE3D-206ENST00000505226 P4HA2O15460 535 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 POLR2MP0CAP2 368 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 RRM1P23921 792 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 WDR4P57081 412 aaKnown RBP12.69□□□□□ -0.38
UBE3D-206ENST00000505226 CDR2Q01850 454 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
UBE3D-206ENST00000505226 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 EURLQ9NYK6 297 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 THAP12O43422 761 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 CETN1Q12798 172 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 PTK6Q13882 451 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 DCLK3Q9C098 648 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 SLC5A4Q9NY91 659 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 UVRAGQ9P2Y5 699 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 ANAPC7Q9UJX3 599 aa12.69□□□□□ -0.38
UBE3D-206ENST00000505226 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 CCNB1P14635 433 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 PDE6BP35913 854 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 STAT2P52630 851 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 RSRC1Q96IZ7 334 aaKnown RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ZHX2Q9Y6X8 837 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 SLC16A4O15374 487 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TCEA3O75764 348 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ADCY8P40145 1251 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 SLC8A3P57103 927 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 RNASELQ05823 741 aaKnown RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ACAD10Q6JQN1 1059 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 HAUS6Q7Z4H7 955 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms