RNA–Protein interactions for RNA: ENST00000504855.1

CCNB3P1-201, Transcript of cyclin B3 pseudogene 1, humanhuman

BASIC

Gene CCNB3P1, Length 1,431 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3P1-201ENST00000504855 RNF225M0QZC1 329 aaPredicted RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 UCHL3P15374 230 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 GCLMP48507 274 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 FAM26DQ5JW98 314 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 CACNA2D4Q7Z3S7 1137 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 ZBTB33Q86T24 672 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 WDR49Q8IV35 697 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 BAP1Q92560 729 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 SENP6Q9GZR1 1112 aaPredicted RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 STARD7Q9NQZ5 370 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 KCND1Q9NSA2 647 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
CCNB3P1-201ENST00000504855 EPHB6O15197 1021 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 B4GALT4O60513 344 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 DLATP10515 647 aaKnown RBP13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 CCL5P13501 91 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 SLC9A1P19634 815 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 GRM5P41594 1212 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 MGAT3Q09327 533 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 PDCD11Q14690 1871 aaKnown RBP13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ZACNQ401N2 412 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 CYP26C1Q6V0L0 522 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 NT5DC4Q86YG4 428 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 CD302Q8IX05 232 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 FBXL13Q8NEE6 735 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 PPP1R13LQ8WUF5 828 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ARMC5Q96C12 935 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 TSPAN18Q96SJ8 248 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ASB7Q9H672 318 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 RPF1Q9H9Y2 349 aaKnown RBP13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 APEX2Q9UBZ4 518 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 GINS2Q9Y248 185 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
CCNB3P1-201ENST00000504855 ARVCFO00192 962 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 CSDE1O75534 798 aaKnown RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 C4BPAP04003 597 aaKnown RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 STAG3L1P0CL83 205 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 TNNI1P19237 187 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 JAM2P57087 298 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 TMEM40Q8WWA1 233 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 CPB2Q96IY4 423 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 DEFB118Q96PH6 123 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 RNF208Q9H0X6 261 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 AIPL1Q9NZN9 384 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
CCNB3P1-201ENST00000504855 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 H0YGN5 161 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 CCP110O43303 1012 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 ZNF500O60304 480 aaPredicted RBP13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 CHRNA1P02708 482 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 TNFSF9P41273 254 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 CDK7P50613 346 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 GOLGA8FQ08AF8 430 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 GOLGA8DPQ0D2H9 430 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 DUOXA2Q1HG44 320 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 SFMBT2Q5VUG0 894 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 ENOSF1Q7L5Y1 443 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 ZNF516Q92618 1163 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 WNT8BQ93098 351 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 ZNF333Q96JL9 665 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 POP1Q99575 1024 aaKnown RBP13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 STK33Q9BYT3 514 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 RAB20Q9NX57 234 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 DERAQ9Y315 318 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
CCNB3P1-201ENST00000504855 GPR182O15218 404 aa13.05□□□□□ -0.32
CCNB3P1-201ENST00000504855 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
CCNB3P1-201ENST00000504855 ACTN1P12814 892 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms