RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ZSWIM2Q8NEG5 633 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 FZD8Q9H461 694 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ZCCHC17Q9NP64 241 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 AVENQ9NQS1 362 aaPredicted RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 SLC5A4Q9NY91 659 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 TELO2Q9Y4R8 837 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ZBTB42B2RXF5 422 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PDHXO00330 501 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 CYP26A1O43174 497 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 BUB1BO60566 1050 aaPredicted RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 SASH3O75995 380 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 SEC31AO94979 1220 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 IL18RAPO95256 599 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 ARIH2O95376 493 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 SGPL1O95470 568 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 HLA-DRAP01903 254 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PGK2P07205 417 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PROZP22891 400 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 MAPK4P31152 587 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 GJA5P36382 358 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 FMO1Q01740 532 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 C2orf54Q08AI8 447 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 CASP8Q14790 479 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 EAPPQ56P03 285 aaPredicted RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 DLK2Q6UY11 383 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 MOB2Q70IA6 237 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 ARMCX2Q7L311 632 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 NOP9Q86U38 636 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 UBL4BQ8N7F7 174 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PPTC7Q8NI37 304 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 AENQ8WTP8 325 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 CAVIN3Q969G5 261 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PARK7Q99497 189 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 LRRC1Q9BTT6 524 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 WNT8AQ9H1J5 351 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 GDF3Q9NR23 364 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 RBM12Q9NTZ6 932 aaKnown RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 PRMT7Q9NVM4 692 aaPredicted RBP10.53□□□□□ -0.72
COL1A1-210ENST00000504289 CNTNAP2Q9UHC6 1331 aa10.53□□□□□ -0.72
COL1A1-210ENST00000504289 CCDC66A2RUB6 948 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 TMCO5BA8MYB1 307 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 FAM189A1O60320 539 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PRKCBP05771 671 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 TMOD1P28289 359 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CXCR5P32302 372 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 USP8P40818 1118 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PIK3CAP42336 1068 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PHKA2P46019 1235 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 NLRP11P59045 1033 aaKnown RBP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PTENP60484 403 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 YWHAEP62258 255 aaKnown RBP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 TNFAIP2Q03169 654 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 ARHGAP1Q07960 439 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PAK2Q13177 524 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CUL1Q13616 776 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CUL2Q13617 745 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 GPR162Q16538 588 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 FAM110CQ1W6H9 321 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CLEC16AQ2KHT3 1053 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 HSP90B2PQ58FF3 399 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 TDRD10Q5VZ19 366 aaKnown RBP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 MPZL3Q6UWV2 235 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 METTL13Q8N6R0 699 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 C2orf69Q8N8R5 385 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 RUNDC3BQ96NL0 473 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 THAP2Q9H0W7 228 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PDE11AQ9HCR9 933 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 PTPRHQ9HD43 1115 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 SEPT11Q9NVA2 429 aaKnown RBP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CTTNBP2NLQ9P2B4 639 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 TNFSF13BQ9Y275 285 aa10.52□□□□□ -0.73
COL1A1-210ENST00000504289 CEP350Q5VT06 3117 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 BTBD19C9JJ37 291 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 BHMG1C9JSJ3 638 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ABLIM1O14639 778 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 DDX3YO15523 660 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms