RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LAG3P18627 525 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 BCAR1P56945 870 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 SPAG1Q07617 926 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 ENOX2Q16206 610 aaKnown RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 KCNT2Q6UVM3 1135 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 ALKAL1Q6UXT8 129 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 RABGGTAQ92696 567 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 FAM212AQ96EL1 285 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 ZMAT2Q96NC0 199 aaKnown RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 GUCD1Q96NT3 240 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 FAM213AQ9BRX8 229 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 AGPAT3Q9NRZ7 376 aa17.98■□□□□ 0.47
SCLT1-205ENST00000503401 TOPORSQ9NS56 1045 aaPredicted RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 CPSF3Q9UKF6 684 aaKnown RBP17.98■□□□□ 0.47
SCLT1-205ENST00000503401 GARTP22102 1010 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 GRIK3Q13003 919 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 CRELD2Q6UXH1 353 aaPredicted RBP17.97■□□□□ 0.47
SCLT1-205ENST00000503401 TMEM173Q86WV6 379 aaPredicted RBP17.97■□□□□ 0.47
SCLT1-205ENST00000503401 TMEM130Q8N3G9 435 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 KLHL23Q8NBE8 558 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 SAMD11Q96NU1 681 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 CLSTN2Q9H4D0 955 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 RPF1Q9H9Y2 349 aaKnown RBP17.97■□□□□ 0.47
SCLT1-205ENST00000503401 ALG13Q9NP73 1137 aaKnown RBP17.97■□□□□ 0.47
SCLT1-205ENST00000503401 MTMR10Q9NXD2 777 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 PCDHB12Q9Y5F1 795 aa17.97■□□□□ 0.47
SCLT1-205ENST00000503401 SMIM28A0A1B0GU29 152 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 THP07101 528 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 GALTP07902 379 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 MCM4P33991 863 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 SLC11A1P49279 550 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 CYP2J2P51589 502 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 ZNF658Q5TYW1 1059 aaPredicted RBP17.96■□□□□ 0.47
SCLT1-205ENST00000503401 HS2ST1Q7LGA3 356 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 COLGALT2Q8IYK4 626 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 MYLIPQ8WY64 445 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 RSPH1Q8WYR4 309 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
SCLT1-205ENST00000503401 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 HSPBP1Q9NZL4 362 aa17.96■□□□□ 0.47
SCLT1-205ENST00000503401 PRRC2BQ5JSZ5 2229 aaKnown RBP17.96■□□□□ 0.47
SCLT1-205ENST00000503401 ATG2AQ2TAZ0 1938 aa17.96■□□□□ 0.46
SCLT1-205ENST00000503401 CASTOR2A6NHX0 329 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 LACTBL1A8MY62 500 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 F8W810 466 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 LPXNO60711 386 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 PRCPP42785 496 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 ALDH7A1P49419 539 aaKnown RBP17.95■□□□□ 0.46
SCLT1-205ENST00000503401 DSC1Q08554 894 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 GPM6BQ13491 265 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 NAB2Q15742 525 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 XKR4Q5GH76 650 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 PPP1R10Q96QC0 940 aaKnown RBP17.95■□□□□ 0.46
SCLT1-205ENST00000503401 PAAF1Q9BRP4 392 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 NUP62CLQ9H1M0 184 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 GOLGA2P5Q9HBQ8 144 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 CNTN3Q9P232 1028 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 PRG3Q9Y2Y8 225 aaPredicted RBP17.95■□□□□ 0.46
SCLT1-205ENST00000503401 XIRP2A4UGR9 3374 aa17.95■□□□□ 0.46
SCLT1-205ENST00000503401 TTC26A0AVF1 554 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 H3BNC9 293 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 GRM6O15303 877 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 ITGB1P05556 798 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 BMP6P22004 513 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 OR1G1P47890 313 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 WNT7BP56706 349 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 PPP2R3AQ06190 1150 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 SOX4Q06945 474 aaPredicted RBP17.94■□□□□ 0.46
SCLT1-205ENST00000503401 KYAT1Q16773 422 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 GUF1Q8N442 669 aaKnown RBP17.94■□□□□ 0.46
SCLT1-205ENST00000503401 BCL7CQ8WUZ0 217 aaPredicted RBP17.94■□□□□ 0.46
SCLT1-205ENST00000503401 C18orf25Q96B23 403 aaPredicted RBP17.94■□□□□ 0.46
SCLT1-205ENST00000503401 C11orf84Q9BUA3 381 aaPredicted RBP17.94■□□□□ 0.46
SCLT1-205ENST00000503401 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 KIAA1468Q9P260 1216 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 NRP1O14786 923 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 EXTL3O43909 919 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 FGF18O76093 207 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 RB1P06400 928 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 KCNE1P15382 129 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 TUSC3Q13454 348 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 CBWD2Q8IUF1 395 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 GPD1LQ8N335 351 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 RDH13Q8NBN7 331 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 KIF12Q96FN5 646 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 FAN1Q9Y2M0 1017 aa17.94■□□□□ 0.46
SCLT1-205ENST00000503401 SPTBN5Q9NRC6 3674 aaKnown RBP17.93■□□□□ 0.46
SCLT1-205ENST00000503401 ALDH2P05091 517 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 CD44P16070 742 aaKnown RBP17.93■□□□□ 0.46
SCLT1-205ENST00000503401 IGFBP4P22692 258 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 DNAJB1P25685 340 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 MORC3Q14149 939 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 JADE1Q6IE81 842 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms