RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 ARMC9Q7Z3E5 817 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 SLFN11Q7Z7L1 901 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 AFAP1L1Q8TED9 768 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 SEPT1Q8WYJ6 367 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 UBXN6Q9BZV1 441 aa12.46□□□□□ -0.42
USP46-204ENST00000503060 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.42
USP46-204ENST00000503060 LRRIQ4A6NIV6 560 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 CES2O00748 559 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 EXTL3O43909 919 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP46-204ENST00000503060 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 PALB2Q86YC2 1186 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 RFFLQ8WZ73 363 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 MMP19Q99542 508 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 EPAS1Q99814 870 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 GOLPH3Q9H4A6 298 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 TAS2R14Q9NYV8 317 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 STYXL1Q9Y6J8 313 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 DNAJC25-GNG10A0A024R161 153 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 TRIM66O15016 1216 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 ARIH2O95376 493 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 PIGRP01833 764 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 FAM163BP0C2L3 166 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 DLATP10515 647 aaKnown RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 MAN1A1P33908 653 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 USP8P40818 1118 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 MFAP3P55082 362 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 PLEKHG6Q3KR16 790 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 SYCE1Q8N0S2 351 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 SHC3Q92529 594 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 RUBCNQ92622 972 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 NT5C1BQ96P26 610 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 ST7Q9NRC1 585 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 RBM12Q9NTZ6 932 aaKnown RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 RAB20Q9NX57 234 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
USP46-204ENST00000503060 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
USP46-204ENST00000503060 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
USP46-204ENST00000503060 ABCB4P21439 1286 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 GJA5P36382 358 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
USP46-204ENST00000503060 MAP9Q49MG5 647 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
USP46-204ENST00000503060 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 PBKQ96KB5 322 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 MED4Q9NPJ6 270 aa12.44□□□□□ -0.42
USP46-204ENST00000503060 K7ERI5 159 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 KCNK3O14649 394 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 SGPL1O95470 568 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 CASP8Q14790 479 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 PSMD6Q15008 389 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 LDLRAD1Q5T700 205 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 PEX26Q7Z412 305 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 KLHL23Q8NBE8 558 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 ARHGEF26Q96DR7 871 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 FAM167AQ96KS9 214 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 MROH8Q9H579 483 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 SUCLA2Q9P2R7 463 aaPredicted RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 DMGDHQ9UI17 866 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 NOCTQ9UK39 431 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 SIP14410 1827 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 ZBTB48P10074 688 aaPredicted RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 CHRNB2P17787 502 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 PRPF4BQ13523 1007 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 CELF3Q5SZQ8 465 aaKnown RBP12.43□□□□□ -0.42
USP46-204ENST00000503060 SLFN12LQ6IEE8 588 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 C15orf39Q6ZRI6 1047 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 DAAM2Q86T65 1068 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 GPR20Q99678 358 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 THAP2Q9H0W7 228 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms