RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GPRC5DQ9NZD1 345 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 IP6K2Q9UHH9 426 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 DDX3XO00571 662 aaKnown RBP eCLIP7.92□□□□□ -1.143e-9■■■■□ 26.3
PDGFC-203ENST00000502773 EPHB6O15197 1021 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 XPOTO43592 962 aaKnown RBP7.92□□□□□ -1.14
PDGFC-203ENST00000502773 HBP1O60381 514 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 PCBP1Q15365 356 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDGFC-203ENST00000502773 DUOXA2Q1HG44 320 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 MTERF2Q49AM1 385 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 METTL7BQ6UX53 244 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 ZNF365Q70YC5 407 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 NT5DC3Q86UY8 548 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 NCAPG2Q86XI2 1143 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 ARMC2Q8NEN0 867 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 SLC30A5Q8TAD4 765 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 ZNF564Q8TBZ8 553 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-203ENST00000502773 SCFD2Q8WU76 684 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 SHC3Q92529 594 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 MAGOHBQ96A72 148 aaKnown RBP7.92□□□□□ -1.14
PDGFC-203ENST00000502773 KLRG1Q96E93 195 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 FBXL18Q96ME1 805 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 FMO2Q99518 471 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 SH3GL3Q99963 347 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 FAN1Q9Y2M0 1017 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 PCDHAC2Q9Y5I4 1007 aa7.92□□□□□ -1.14
PDGFC-203ENST00000502773 ASTN2O75129 1339 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ECEL1O95672 775 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 FGGP02679 453 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ERCC3P19447 782 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 HSPA9P38646 679 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PHKA2P46019 1235 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 DNA2P51530 1060 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 IRX1P78414 480 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ZNF484Q5JVG2 852 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PLPPR4Q7Z2D5 763 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 CCDC89Q8N998 374 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ADPGKQ9BRR6 497 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ROPN1BQ9BZX4 212 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PORCNQ9H237 461 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ROPN1Q9HAT0 212 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 RBM12Q9NTZ6 932 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 KIAA1257Q9ULG3 409 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 RCCD1A6NED2 376 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 TRIM49P0CI25 452 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 TRIM49CP0CI26 452 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 DLATP10515 647 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ATF7P17544 494 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 COPS2P61201 443 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 GADL1Q6ZQY3 521 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ANKS4BQ8N8V4 417 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 UBLCP1Q8WVY7 318 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 SGSM3Q96HU1 749 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 RNPC3Q96LT9 517 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 TEPSINQ96N21 525 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 UIMC1Q96RL1 719 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 CGRRF1Q99675 332 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 INO80BQ9C086 356 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PARVAQ9NVD7 372 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 DUSP10Q9Y6W6 482 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 COL11A2P13942 1736 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 MYH7BA7E2Y1 1941 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 IQCA1LA6NCM1 817 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 FOXN3O00409 490 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PSTPIP1O43586 416 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 CYP1A2P05177 515 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 TMEM191BP0C7N4 346 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PTENP60484 403 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 MRPS9P82933 396 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 POU5F1BQ06416 359 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 NR1H3Q13133 447 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 MAPK7Q13164 816 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ITGB3BPQ13352 177 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 NBPF12Q5TAG4 269 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 ABHD15Q6UXT9 468 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PCGF5Q86SE9 256 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 WDR49Q8IV35 697 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 RHOT1Q8IXI2 618 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 METTL13Q8N6R0 699 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 GLIS3Q8NEA6 775 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 TMEM117Q9H0C3 514 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PLEKHA4Q9H4M7 779 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 SIX2Q9NPC8 291 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 CNOT8Q9UFF9 292 aaKnown RBP7.91□□□□□ -1.14
PDGFC-203ENST00000502773 PCDHB4Q9Y5E5 795 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 CAPN7Q9Y6W3 813 aa7.91□□□□□ -1.14
PDGFC-203ENST00000502773 KIF3CO14782 793 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 ITIH2P19823 946 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 CXCR5P32302 372 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 LAMC2Q13753 1193 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 LBX2Q6XYB7 198 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 TRMT10CQ7L0Y3 403 aaKnown RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 SRLQ86TD4 932 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 LRRC57Q8N9N7 239 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 ZSWIM1Q9BR11 485 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 PRMT7Q9NVM4 692 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 RBAKQ9NYW8 714 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 ALG6Q9Y672 507 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 NKRFO15226 690 aaKnown RBP eCLIP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms