RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 EXOC1Q9NV70 894 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 RMND1Q9NWS8 449 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 SNTG2Q9NY99 539 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 SPG21Q9NZD8 308 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 CPSF3Q9UKF6 684 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 DERAQ9Y315 318 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
UBE2D3-212ENST00000502563 CITO14578 2027 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 TDRD15B5MCY1 1934 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 NCK2O43639 380 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 FGF18O76093 207 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 RPN1P04843 607 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 MYBP10242 640 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 FOSL2P15408 326 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 LIG1P18858 919 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 AKAP5P24588 427 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 PPP1R2P41236 205 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 SCNN1GP51170 649 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 KNOP1Q1ED39 458 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 FOXR2Q6PJQ5 311 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 SPRED2Q7Z698 418 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 SLC9A9Q8IVB4 645 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 CEP120Q8N960 986 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 ZBTB45Q96K62 511 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 FAM193BQ96PV7 902 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 BLZF1Q9H2G9 400 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 NGRNQ9NPE2 291 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 ANKFY1Q9P2R3 1169 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 AGO2Q9UKV8 859 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 C2CD2Q9Y426 696 aa11.7□□□□□ -0.54
UBE2D3-212ENST00000502563 SMIM28A0A1B0GU29 152 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 FSCN2O14926 492 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 KINO60870 393 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 DDHD2O94830 711 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 SMC2O95347 1197 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 POMCP01189 267 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 HOXD13P35453 343 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 ENPEPQ07075 957 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 KCNA1Q09470 495 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 STK4Q13043 487 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 CAMK1Q14012 370 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 BMS1Q14692 1282 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 ZBTB6Q15916 424 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 SLC10A6Q3KNW5 377 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 HS2ST1Q7LGA3 356 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 ZNF280BQ86YH2 543 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 GUF1Q8N442 669 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 PPP2R3CQ969Q6 453 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 CDCA3Q99618 268 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 MSTO1Q9BUK6 570 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 FGFBP2Q9BYJ0 223 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 TLR9Q9NR96 1032 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 MIOSQ9NXC5 875 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 TBC1D7Q9P0N9 293 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 INPP5FQ9Y2H2 1132 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
UBE2D3-212ENST00000502563 PDCD11Q14690 1871 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 ANKRD63C9JTQ0 380 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 RBAK-RBAKDNI3L0D1 243 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 PDXKO00764 312 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 NRP1O14786 923 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 EXTL3O43909 919 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 IL18RAPO95256 599 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 LRPAP1P30533 357 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 SLC11A1P49279 550 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 PPP2R3AQ06190 1150 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 ELAVL2Q12926 359 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 ENOX2Q16206 610 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 CRELD2Q6UXH1 353 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 BRSK2Q8IWQ3 736 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 GRAMD1CQ8IYS0 662 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 SYCP3Q8IZU3 236 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 POF1BQ8WVV4 589 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 POMGNT1Q8WZA1 660 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 COLEC11Q9BWP8 271 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 RPF1Q9H9Y2 349 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 AGPAT3Q9NRZ7 376 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms