RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 RBM43Q6ZSC3 357 aaKnown RBP15.44■□□□□ 0.06
RNF4-202ENST00000502316 ZNF280BQ86YH2 543 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 SLC9A9Q8IVB4 645 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 ADSSL1Q8N142 457 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 FBXL18Q96ME1 805 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 PPP1R10Q96QC0 940 aaKnown RBP15.44■□□□□ 0.06
RNF4-202ENST00000502316 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 NRDE2Q9H7Z3 1164 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 MAPK8IP1Q9UQF2 711 aa15.44■□□□□ 0.06
RNF4-202ENST00000502316 TDRD15B5MCY1 1934 aaKnown RBP15.44■□□□□ 0.06
RNF4-202ENST00000502316 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 DDHD2O94830 711 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 RB1P06400 928 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 THP07101 528 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 PTMSP20962 102 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 PPP1R2P41236 205 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 RNASELQ05823 741 aaKnown RBP15.43■□□□□ 0.06
RNF4-202ENST00000502316 MYBPC2Q14324 1141 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 NFIL3Q16649 462 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 CENPPQ6IPU0 288 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 COLGALT2Q8IYK4 626 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 GPD1LQ8N335 351 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 COLGALT1Q8NBJ5 622 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 ZSWIM2Q8NEG5 633 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 P2RX5Q93086 422 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 SAAL1Q96ER3 474 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
RNF4-202ENST00000502316 TSPAN18Q96SJ8 248 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 FAM213AQ9BRX8 229 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 TMEM175Q9BSA9 504 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 SEMA6BQ9H3T3 888 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 PCIF1Q9H4Z3 704 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 RPF1Q9H9Y2 349 aaKnown RBP15.43■□□□□ 0.06
RNF4-202ENST00000502316 KIAA1586Q9HCI6 787 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 AAASQ9NRG9 546 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 DMAC2Q9NW81 257 aa15.43■□□□□ 0.06
RNF4-202ENST00000502316 PDCD11Q14690 1871 aaKnown RBP15.43■□□□□ 0.06
RNF4-202ENST00000502316 TRIP11Q15643 1979 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 EYSQ5T1H1 3165 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 BIN1O00499 593 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 CLIC2O15247 247 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 ZC3H11AO75152 810 aaKnown RBP eCLIP15.42■□□□□ 0.06
RNF4-202ENST00000502316 CTNNB1P35222 781 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 BCAR1P56945 870 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 PPP2R3AQ06190 1150 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 TUSC3Q13454 348 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 HSP90AA2PQ14568 343 aaPredicted RBP15.42■□□□□ 0.06
RNF4-202ENST00000502316 GLRA4Q5JXX5 417 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 ISM2Q6H9L7 571 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 KCNT2Q6UVM3 1135 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 BRSK2Q8IWQ3 736 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 CD302Q8IX05 232 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 XXYLT1Q8NBI6 393 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 ZNF558Q96NG5 402 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 ASB7Q9H672 318 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 DNAJB4Q9UDY4 337 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 PCDHB12Q9Y5F1 795 aa15.42■□□□□ 0.06
RNF4-202ENST00000502316 EPOPA6NHQ4 379 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 LACTBL1A8MY62 500 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 H3BNC9 293 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 IL18RAPO95256 599 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 NR3C1P04150 777 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 GALTP07902 379 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 PPM1AP35813 382 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 SLC11A1P49279 550 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 ALDH7A1P49419 539 aaKnown RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 STIM1Q13586 685 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 ZBTB6Q15916 424 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 KLHL40Q2TBA0 621 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 EDRF1Q3B7T1 1238 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 SPOUT1Q5T280 376 aaKnown RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 FBXO22Q8NEZ5 403 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 DHTKD1Q96HY7 919 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 FAM193BQ96PV7 902 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 C11orf84Q9BUA3 381 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 CERS4Q9HA82 394 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 SLC38A7Q9NVC3 462 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 RBAKQ9NYW8 714 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 DERAQ9Y315 318 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 ANK1P16157 1881 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
RNF4-202ENST00000502316 REV3LO60673 3130 aa15.41■□□□□ 0.06
RNF4-202ENST00000502316 GOLGA8IPA6NC78 632 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 GOLGA8JA6NMD2 632 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 PSMA7O14818 248 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 PBX3P40426 434 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 CYP2J2P51589 502 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 LRRC63Q05C16 580 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 SNRNP35Q16560 246 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms