RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 DLL1O00548 723 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 TLL1O43897 1013 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 KRT13P13646 458 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 PSMC2P35998 433 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 MLH1P40692 756 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 GATMP50440 423 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 MYBPC2Q14324 1141 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 NFIL3Q16649 462 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 SPOUT1Q5T280 376 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 TTI2Q6NXR4 508 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 AGMOQ6ZNB7 445 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 FAM186BQ8IYM0 893 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 PHOSPHO2Q8TCD6 241 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 RNF19AQ9NV58 838 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 CPSF3Q9UKF6 684 aaKnown RBP12.44□□□□□ -0.42
CTTN-208ENST00000498223 A0A0C4DFX4 3053 aa12.44□□□□□ -0.42
CTTN-208ENST00000498223 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 BECN2A8MW95 431 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 LACTBL1A8MY62 500 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 OFD1O75665 1012 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 IL18RAPO95256 599 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 POMCP01189 267 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 DNAJB2P25686 324 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 CASP4P49662 377 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 ZNF165P49910 485 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 SPAG1Q07617 926 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 BTG3Q14201 252 aaPredicted RBP12.43□□□□□ -0.42
CTTN-208ENST00000498223 SURF1Q15526 300 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 ENOX2Q16206 610 aaKnown RBP12.43□□□□□ -0.42
CTTN-208ENST00000498223 ZCWPW2Q504Y3 356 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 NOMO2Q5JPE7 1267 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 GLRA4Q5JXX5 417 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 CLLU1OSQ5K130 101 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 SLC9A9Q8IVB4 645 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 AOPEPQ8N6M6 819 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 ZFP42Q96MM3 310 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 CEP63Q96MT8 703 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 DUSP9Q99956 384 aaKnown RBP12.43□□□□□ -0.42
CTTN-208ENST00000498223 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 PLEKHA5Q9HAU0 1116 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
CTTN-208ENST00000498223 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
CTTN-208ENST00000498223 MYO9BQ13459 2157 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 SMTNL1A8MU46 457 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 XPOTO43592 962 aaKnown RBP12.42□□□□□ -0.42
CTTN-208ENST00000498223 DGKIO75912 1065 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 AKAP3O75969 853 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 GJB5O95377 273 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 THP07101 528 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 ADRB2P07550 413 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
CTTN-208ENST00000498223 TNNI1P19237 187 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 SCNN1GP51170 649 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 RABGGTBP53611 331 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 TPM4P67936 248 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 MYL5Q02045 173 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 SLC10A6Q3KNW5 377 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
CTTN-208ENST00000498223 FILIP1Q7Z7B0 1213 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 USP37Q86T82 979 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTTN-208ENST00000498223 CD302Q8IX05 232 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 SNX27Q96L92 541 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 FUCA2Q9BTY2 467 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
CTTN-208ENST00000498223 PDE11AQ9HCR9 933 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
CTTN-208ENST00000498223 CDH23Q9H251 3354 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 TTC26A0AVF1 554 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 SLC16A3O15427 465 aaKnown RBP12.41□□□□□ -0.42
CTTN-208ENST00000498223 FAM189A1O60320 539 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 CLSTN1O94985 981 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 GNA14O95837 355 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 TMEM191BP0C7N4 346 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 FOSL2P15408 326 aa12.41□□□□□ -0.42
CTTN-208ENST00000498223 SCN1AP35498 2009 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms