RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 PCDHB12Q9Y5F1 795 aa17.68■□□□□ 0.42
FAM3A-220ENST00000497506 SMIM28A0A1B0GU29 152 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 TTC26A0AVF1 554 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 THP07101 528 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 ADRB2P07550 413 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 GALTP07902 379 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 CXCL8P10145 99 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 SLC11A1P49279 550 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 ACOT2P49753 483 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 GPM6BQ13491 265 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 SLC39A11Q8N1S5 342 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 GDPD5Q8WTR4 605 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 ZMAT2Q96NC0 199 aaKnown RBP17.67■□□□□ 0.42
FAM3A-220ENST00000497506 FAM193BQ96PV7 902 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-220ENST00000497506 PPP1R10Q96QC0 940 aaKnown RBP17.67■□□□□ 0.42
FAM3A-220ENST00000497506 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 C11orf84Q9BUA3 381 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-220ENST00000497506 KCTD10Q9H3F6 313 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 PCIF1Q9H4Z3 704 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 AGPAT3Q9NRZ7 376 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 CNTN3Q9P232 1028 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 CDH23Q9H251 3354 aa17.67■□□□□ 0.42
FAM3A-220ENST00000497506 NT5C1B-RDH14C9J2C7 533 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 GRM6O15303 877 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ITGB1P05556 798 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 KCNE1P15382 129 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ALDH7A1P49419 539 aaKnown RBP17.66■□□□□ 0.42
FAM3A-220ENST00000497506 SNRPFP62306 86 aaKnown RBP17.66■□□□□ 0.42
FAM3A-220ENST00000497506 CAMK4Q16566 473 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ZNF658Q5TYW1 1059 aaPredicted RBP17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ARMCX5Q6P1M9 558 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 GUF1Q8N442 669 aaKnown RBP17.66■□□□□ 0.42
FAM3A-220ENST00000497506 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 MYLIPQ8WY64 445 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 SAAL1Q96ER3 474 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 CLSTN2Q9H4D0 955 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ALG13Q9NP73 1137 aaKnown RBP17.66■□□□□ 0.42
FAM3A-220ENST00000497506 SPG21Q9NZD8 308 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 MAN1B1Q9UKM7 699 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 MAPK8IP1Q9UQF2 711 aa17.66■□□□□ 0.42
FAM3A-220ENST00000497506 ATG2AQ2TAZ0 1938 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 GOLGA8IPA6NC78 632 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 GOLGA8JA6NMD2 632 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 LACTBL1A8MY62 500 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 NRP1O14786 923 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 FGF18O76093 207 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 ALDH2P05091 517 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 POU3F3P20264 500 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 POU5F1Q01860 360 aaKnown RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 PLCB3Q01970 1234 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 TUSC3Q13454 348 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 HS2ST1Q7LGA3 356 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 TMEM173Q86WV6 379 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 C12orf56Q8IXR9 622 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 SMYD4Q8IYR2 804 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 SPPL3Q8TCT6 385 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 BCL7CQ8WUZ0 217 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 FAM213AQ9BRX8 229 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 RPF1Q9H9Y2 349 aaKnown RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 HSPBP1Q9NZL4 362 aa17.65■□□□□ 0.42
FAM3A-220ENST00000497506 CGNQ9P2M7 1197 aaKnown RBP17.65■□□□□ 0.42
FAM3A-220ENST00000497506 CARNS1A5YM72 827 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 PDXKO00764 312 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 KIAA0391O15091 583 aaKnown RBP17.64■□□□□ 0.41
FAM3A-220ENST00000497506 CLIC2O15247 247 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 EXTL3O43909 919 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 LDHAP00338 332 aaKnown RBP17.64■□□□□ 0.41
FAM3A-220ENST00000497506 DNAJB1P25685 340 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 PPM1AP35813 382 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 SOX4Q06945 474 aaPredicted RBP17.64■□□□□ 0.41
FAM3A-220ENST00000497506 COBLL1Q53SF7 1204 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 GPD1LQ8N335 351 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 IGSF21Q96ID5 467 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 PAAF1Q9BRP4 392 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 CACNG4Q9UBN1 327 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 FAN1Q9Y2M0 1017 aa17.64■□□□□ 0.41
FAM3A-220ENST00000497506 KIF20AO95235 890 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 BMP6P22004 513 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 MCM4P33991 863 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 PRCPP42785 496 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 OR1G1P47890 313 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 PPP2R3AQ06190 1150 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 SPAG1Q07617 926 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 CAMK1Q14012 370 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 MORC3Q14149 939 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 ZBTB6Q15916 424 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 ISM2Q6H9L7 571 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 CD302Q8IX05 232 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 GOLGA5Q8TBA6 731 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 TMEM174Q8WUU8 243 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 RABGGTAQ92696 567 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
FAM3A-220ENST00000497506 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
FAM3A-220ENST00000497506 GAS2L1Q99501 681 aaPredicted RBP17.63■□□□□ 0.41
FAM3A-220ENST00000497506 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
FAM3A-220ENST00000497506 DMAC2Q9NW81 257 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms