RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 TLR9Q9NR96 1032 aa10.73□□□□□ -0.69
CALD1-223ENST00000496024 TOPORSQ9NS56 1045 aaPredicted RBP10.73□□□□□ -0.69
CALD1-223ENST00000496024 EXOC7Q9UPT5 735 aa10.73□□□□□ -0.69
CALD1-223ENST00000496024 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
CALD1-223ENST00000496024 A0A0B4J269 797 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 OGTO15294 1046 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 KLRC4O43908 158 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 NR1I2O75469 434 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 CLTAP09496 248 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 CXCL8P10145 99 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 PLCB3Q01970 1234 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 UBE3AQ05086 875 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 DSC1Q08554 894 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 ALCAMQ13740 583 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 SLC10A6Q3KNW5 377 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 RBM23Q86U06 439 aaKnown RBP10.72□□□□□ -0.69
CALD1-223ENST00000496024 NELFCDQ8IXH7 590 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 HASPINQ8TF76 798 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 AUTS2Q8WXX7 1259 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 POMGNT1Q8WZA1 660 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 KCNN1Q92952 543 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 SNX27Q96L92 541 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
CALD1-223ENST00000496024 TCF25Q9BQ70 676 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 TMEM175Q9BSA9 504 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 COLEC11Q9BWP8 271 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 PCIF1Q9H4Z3 704 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 NSUN3Q9H649 340 aaKnown RBP10.72□□□□□ -0.69
CALD1-223ENST00000496024 GOLGA2P5Q9HBQ8 144 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 EXOC1Q9NV70 894 aa10.72□□□□□ -0.69
CALD1-223ENST00000496024 AGO2Q9UKV8 859 aaKnown RBP10.72□□□□□ -0.69
CALD1-223ENST00000496024 SMIM28A0A1B0GU29 152 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 PVALEFA0A1B0GWK0 134 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 MEFVO15553 781 aaPredicted RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 RPN1P04843 607 aaKnown RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
CALD1-223ENST00000496024 NRIP1P48552 1158 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 TUSC3Q13454 348 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 ENOX2Q16206 610 aaKnown RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 SLFN12LQ6IEE8 588 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 ALKAL1Q6UXT8 129 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 ADGRD2Q7Z7M1 963 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 FMR1NBQ8N0W7 255 aaPredicted RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 VPS52Q8N1B4 723 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 C18orf25Q96B23 403 aaPredicted RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 SAAL1Q96ER3 474 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 CCDC34Q96HJ3 373 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 ZMAT2Q96NC0 199 aaKnown RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 VN1R3Q9BXE9 311 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 TMEM206Q9H813 350 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 RPF1Q9H9Y2 349 aaKnown RBP10.71□□□□□ -0.69
CALD1-223ENST00000496024 MARCH5Q9NX47 278 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 LZTS1Q9Y250 596 aa10.71□□□□□ -0.69
CALD1-223ENST00000496024 GOLGA8IPA6NC78 632 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 GOLGA8JA6NMD2 632 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 LACTBL1A8MY62 500 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 PER2O15055 1255 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 FAM189A1O60320 539 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 TADA2AO75478 443 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 CXCL14O95715 111 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 ADSSP30520 456 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 HOXD13P35453 343 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 PPP2R3AQ06190 1150 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 SOX4Q06945 474 aaPredicted RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 EHHADHQ08426 723 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 HYAL1Q12794 435 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 DPYDQ12882 1025 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 PNOCQ13519 176 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 HSP90AA2PQ14568 343 aaPredicted RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 POSTNQ15063 836 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 NAB2Q15742 525 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 KYAT1Q16773 422 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 KANK3Q6NY19 840 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 ARMCX5Q6P1M9 558 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 EPM2AIP1Q7L775 607 aaPredicted RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 TAS1R1Q7RTX1 841 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 DDX53Q86TM3 631 aaKnown RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 ENGASEQ8NFI3 743 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 SCFD1Q8WVM8 642 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 ERCC4Q92889 916 aaPredicted RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 PPP2R3CQ969Q6 453 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 CCDC47Q96A33 483 aaKnown RBP10.7□□□□□ -0.7
CALD1-223ENST00000496024 KIF12Q96FN5 646 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 B3GALT6Q96L58 329 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 CBWD1Q9BRT8 395 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 FAM213AQ9BRX8 229 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 TLE6Q9H808 572 aa10.7□□□□□ -0.7
CALD1-223ENST00000496024 STYXL1Q9Y6J8 313 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms