RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 CITO14578 2027 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 FGF18O76093 207 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 GALTP07902 379 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 CXCL8P10145 99 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 PBX3P40426 434 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 TNFSF9P41273 254 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 ACOT2P49753 483 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 UBE3AQ05086 875 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 SNX27Q96L92 541 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 FAM213AQ9BRX8 229 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 LMAN2LQ9H0V9 348 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 LMCD1Q9NZU5 365 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
CSNK1E-213ENST00000495232 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 PTGESO14684 152 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 NRP1O14786 923 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 ITGB1P05556 798 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 ADSSP30520 456 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 SLC11A1P49279 550 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 DSC1Q08554 894 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 TUSC3Q13454 348 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 SLC10A6Q3KNW5 377 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 CD302Q8IX05 232 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 GPD1LQ8N335 351 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 MRPL38Q96DV4 380 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 SAAL1Q96ER3 474 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 UROC1Q96N76 676 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 KIAA1586Q9HCI6 787 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 PRG3Q9Y2Y8 225 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-213ENST00000495232 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.31
CSNK1E-213ENST00000495232 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 CLIC2O15247 247 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 GRM6O15303 877 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 CALUO43852 315 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 EXTL3O43909 919 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 FAM189A1O60320 539 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 LPXNO60711 386 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 TADA2AO75478 443 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 CSPG5O95196 566 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 KCNE1P15382 129 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 HOXD13P35453 343 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 POU5F1Q01860 360 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 STIM1Q13586 685 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 CAMK4Q16566 473 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 ZBTB41Q5SVQ8 909 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 PPP1R10Q96QC0 940 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 MAPK8IP1Q9UQF2 711 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 TRIP11Q15643 1979 aa13.14□□□□□ -0.31
CSNK1E-213ENST00000495232 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 ZNF233A6NK53 670 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 LACTBL1A8MY62 500 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 PDXKO00764 312 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 IL18RAPO95256 599 aa13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-213ENST00000495232 CA8P35219 290 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms