RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 BCL7CQ8WUZ0 217 aaPredicted RBP12.13□□□□□ -0.47
APTX-230ENST00000494649 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
APTX-230ENST00000494649 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
APTX-230ENST00000494649 HVCN1Q96D96 273 aa12.13□□□□□ -0.47
APTX-230ENST00000494649 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
APTX-230ENST00000494649 OGTO15294 1046 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-230ENST00000494649 ITGB1P05556 798 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 DNAJB1P25685 340 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 GUCY2FP51841 1108 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 WNT7BP56706 349 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 ALCAMQ13740 583 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 CCDC85BQ15834 202 aaPredicted RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 ENOX2Q16206 610 aaKnown RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 KNOP1Q1ED39 458 aaKnown RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 SNX27Q96L92 541 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 ZNF558Q96NG5 402 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 AGPAT3Q9NRZ7 376 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 MAN1B1Q9UKM7 699 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 TRIP11Q15643 1979 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 SMIM28A0A1B0GU29 152 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 LPXNO60711 386 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 FGF18O76093 207 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 SMC2O95347 1197 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 THP07101 528 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 GALTP07902 379 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 FOSL2P15408 326 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 LAG3P18627 525 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 ABCD1P33897 745 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 CA8P35219 290 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 SOX4Q06945 474 aaPredicted RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 RPF1Q9H9Y2 349 aaKnown RBP12.12□□□□□ -0.47
APTX-230ENST00000494649 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
APTX-230ENST00000494649 COL4A4P53420 1690 aaPredicted RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 NRP1O14786 923 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 CLTAP09496 248 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 GRIK3Q13003 919 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 PSMD2Q13200 908 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 KCNB1Q14721 858 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 LMBRD2Q68DH5 695 aaPredicted RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 FAM43BQ6ZT52 329 aaPredicted RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 POF1BQ8WVV4 589 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 KCNN1Q92952 543 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 B3GALT6Q96L58 329 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 GAS2L1Q99501 681 aaPredicted RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 CPSF3Q9UKF6 684 aaKnown RBP12.11□□□□□ -0.47
APTX-230ENST00000494649 STYXL1Q9Y6J8 313 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 UNC80Q8N2C7 3258 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 MYO7AQ13402 2215 aa12.11□□□□□ -0.47
APTX-230ENST00000494649 H3BNC9 293 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 NFICP08651 508 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 BMP6P22004 513 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 SCP2P22307 547 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 IRS1P35568 1242 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 PRCPP42785 496 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 CLCNKBP51801 687 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 PPP2R3AQ06190 1150 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 KLHL10Q6JEL2 608 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 AUTS2Q8WXX7 1259 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 C11orf84Q9BUA3 381 aaPredicted RBP12.1□□□□□ -0.47
APTX-230ENST00000494649 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 ALDH2P05091 517 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 DSC1Q08554 894 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 NAB2Q15742 525 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 ZNF658Q5TYW1 1059 aaPredicted RBP12.1□□□□□ -0.47
APTX-230ENST00000494649 JADE1Q6IE81 842 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 MICAL1Q8TDZ2 1067 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 PPP1R10Q96QC0 940 aaKnown RBP12.1□□□□□ -0.47
APTX-230ENST00000494649 NUP62CLQ9H1M0 184 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 KCTD10Q9H3F6 313 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 RMND1Q9NWS8 449 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
APTX-230ENST00000494649 RWDD3Q9Y3V2 267 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 PRRC2BQ5JSZ5 2229 aaKnown RBP12.1□□□□□ -0.47
APTX-230ENST00000494649 VCANP13611 3396 aa12.1□□□□□ -0.47
APTX-230ENST00000494649 TTC26A0AVF1 554 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms