RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 GPBP1Q86WP2 473 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 HASPINQ8TF76 798 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 ACAP3Q96P50 834 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 PPP1R10Q96QC0 940 aaKnown RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 FNIP2Q9P278 1114 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 BRD1O95696 1058 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 MYBP10242 640 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 MCF2P10911 925 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 GLRA4Q5JXX5 417 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 FAM171A1Q5VUB5 890 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 LILRA6Q6PI73 481 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 HAUS6Q7Z4H7 955 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 RAD54LQ92698 747 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 SNX21Q969T3 373 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 REEP2Q9BRK0 252 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-216ENST00000494613 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
LIMS2-216ENST00000494613 CCDC195A0A1B0GUA6 201 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 STX6O43752 255 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 TOM1L1O75674 476 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 KIF4AO95239 1232 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 C1RP00736 705 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
LIMS2-216ENST00000494613 CLCNKBP51801 687 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 ZXDAP98168 799 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-216ENST00000494613 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-216ENST00000494613 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
LIMS2-216ENST00000494613 TTPALQ9BTX7 342 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-216ENST00000494613 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
LIMS2-216ENST00000494613 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIMS2-216ENST00000494613 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 H0YCG3 227 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 CLDN3O15551 220 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 TGM5O43548 720 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 B3GAT3O94766 335 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 FAM13AO94988 1023 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 GLUD1P00367 558 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 ZNF131P52739 623 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 SLC39A14Q15043 492 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 UPP1Q16831 310 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 SEZ6Q53EL9 994 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 RTP2Q5QGT7 225 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 PANK2Q9BZ23 570 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 HAPLN2Q9GZV7 340 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 MAN1C1Q9NR34 630 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 DPP7Q9UHL4 492 aa17.08■□□□□ 0.32
LIMS2-216ENST00000494613 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 TRAK2O60296 914 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 KCNE1P15382 129 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 SOX4Q06945 474 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 MCL1Q07820 350 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 TRIM67Q6ZTA4 783 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 LARP4BQ92615 738 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 KCNN1Q92952 543 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 DDX27Q96GQ7 796 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 UROC1Q96N76 676 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 PLEKHA4Q9H4M7 779 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
LIMS2-216ENST00000494613 CCDC39Q9UFE4 941 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 LIMD1Q9UGP4 676 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 TBX20Q9UMR3 447 aa17.07■□□□□ 0.32
LIMS2-216ENST00000494613 TMEM189-UBE2V1I3L0A0 370 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 RFPL2O75678 378 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms