RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	GART	P22102	1010 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	SNRPF	P62306	86 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	POU5F1	Q01860	360 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	PLCB3	Q01970	1234 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	PPP2R3A	Q06190	1150 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	DSC1	Q08554	894 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	KCNA1	Q09470	495 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	TUSC3	Q13454	348 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	KCNB1	Q14721	858 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	BMT2	Q1RMZ1	405 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	TIGD5	Q53EQ6	642 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	ARMCX5	Q6P1M9	558 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	ZNF280B	Q86YH2	543 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	CD302	Q8IX05	232 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	COLGALT2	Q8IYK4	626 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	SLC39A11	Q8N1S5	342 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	GLIS3	Q8NEA6	775 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	GSTCD	Q8NEC7	633 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	GOLGA5	Q8TBA6	731 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	MRPL38	Q96DV4	380 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	TMEM169	Q96HH4	297 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	UROC1	Q96N76	676 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	GSDMA	Q96QA5	445 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	TSPAN18	Q96SJ8	248 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	GTPBP4	Q9BZE4	634 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	ALG13	Q9NP73	1137 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	SLC39A2	Q9NP94	309 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	CNTN3	Q9P232	1028 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	CGN	Q9P2M7	1197 aa	Known RBP	10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	DNAJB4	Q9UDY4	337 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	CHD7	Q9P2D1	2997 aa		10.89	□□□□□ -0.67
MACF1-222	ENST00000494012	TISP43	B9A030	160 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	GRM6	O15303	877 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	GALT	P07902	379 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	CXCL8	P10145	99 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	KCNE1	P15382	129 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PBX3	P40426	434 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	OR1G1	P47890	313 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	SLC11A1	P49279	550 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	STK4	Q13043	487 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PNOC	Q13519	176 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	ADGRE1	Q14246	886 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	BMS1	Q14692	1282 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	KNOP1	Q1ED39	458 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	XKR4	Q5GH76	650 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	GLRA4	Q5JXX5	417 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PDE12	Q6L8Q7	609 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	ALKAL1	Q6UXT8	129 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	SCFD1	Q8WVM8	642 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	SMARCE1	Q969G3	411 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PPP2R3C	Q969Q6	453 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	IGSF21	Q96ID5	467 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PPP1R10	Q96QC0	940 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	COLEC11	Q9BWP8	271 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	HAPLN2	Q9GZV7	340 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	RPF1	Q9H9Y2	349 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	TLR9	Q9NR96	1032 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	CPSF3	Q9UKF6	684 aa	Known RBP	10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	FAN1	Q9Y2M0	1017 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	MTCH2	Q9Y6C9	303 aa		10.88	□□□□□ -0.67
MACF1-222	ENST00000494012	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	SMIM28	A0A1B0GU29	152 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	TTC26	A0AVF1	554 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	NRP1	O14786	923 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	XPOT	O43592	962 aa	Known RBP	10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	B4GALT3	O60512	393 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	ADSS	P30520	456 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	TNFSF9	P41273	254 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	ACOT2	P49753	483 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	NAB2	Q15742	525 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	ENOX2	Q16206	610 aa	Known RBP	10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	SLC10A6	Q3KNW5	377 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	SEZ6	Q53EL9	994 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	NELFCD	Q8IXH7	590 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	KIAA0895	Q8NCT3	520 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	MAFA	Q8NHW3	353 aa	Predicted RBP	10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	SPPL3	Q8TCT6	385 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	POF1B	Q8WVV4	589 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	IKZF4	Q9H2S9	585 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	KIAA1586	Q9HCI6	787 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	AGPAT3	Q9NRZ7	376 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	MIOS	Q9NXC5	875 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	UNC80	Q8N2C7	3258 aa		10.87	□□□□□ -0.67
MACF1-222	ENST00000494012	FSD2	A1L4K1	749 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	CASTOR2	A6NHX0	329 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	NT5C1B-RDH14	C9J2C7	533 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	EXTL3	O43909	919 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	IL18RAP	O95256	599 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	ADRB2	P07550	413 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	HOXD13	P35453	343 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	ZBTB41	Q5SVQ8	909 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	DDX53	Q86TM3	631 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	TMEM173	Q86WV6	379 aa	Predicted RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	NT5DC4	Q86YG4	428 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	C12orf56	Q8IXR9	622 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	GPD1L	Q8N335	351 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	MICALL1	Q8N3F8	863 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	GUF1	Q8N442	669 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	SPATA20	Q8TB22	786 aa		10.86	□□□□□ -0.67

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