RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CRHR1P34998 444 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 ADCYAP1R1P41586 468 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 Q6ZNX1 250 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 LYSMD2Q8IV50 215 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 RHOT2Q8IXI1 618 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 TMEM132CQ8N3T6 1108 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 SLC5A5Q92911 643 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 NINJ1Q92982 152 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 EAF2Q96CJ1 260 aaPredicted RBP6.01□□□□□ -1.45
SMC4-223ENST00000493695 TARS2Q9BW92 718 aaKnown RBP6.01□□□□□ -1.45
SMC4-223ENST00000493695 SLC29A3Q9BZD2 475 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 MTO1Q9Y2Z2 717 aaKnown RBP6.01□□□□□ -1.45
SMC4-223ENST00000493695 MAST3O60307 1309 aa6□□□□□ -1.45
SMC4-223ENST00000493695 CXorf49A8MYA2 514 aaPredicted RBP6□□□□□ -1.45
SMC4-223ENST00000493695 ERN1O75460 977 aaKnown RBP6□□□□□ -1.45
SMC4-223ENST00000493695 ABCG1P45844 678 aa6□□□□□ -1.45
SMC4-223ENST00000493695 MRPS35P82673 323 aaKnown RBP6□□□□□ -1.45
SMC4-223ENST00000493695 ZNF169Q14929 603 aaPredicted RBP6□□□□□ -1.45
SMC4-223ENST00000493695 TKFCQ3LXA3 575 aa6□□□□□ -1.45
SMC4-223ENST00000493695 CCDC144BQ3MJ40 725 aa6□□□□□ -1.45
SMC4-223ENST00000493695 ATP13A4Q4VNC1 1196 aa6□□□□□ -1.45
SMC4-223ENST00000493695 FAM47AQ5JRC9 791 aa6□□□□□ -1.45
SMC4-223ENST00000493695 AKNAD1Q5T1N1 836 aa6□□□□□ -1.45
SMC4-223ENST00000493695 FOXR2Q6PJQ5 311 aa6□□□□□ -1.45
SMC4-223ENST00000493695 C16orf86Q6ZW13 317 aa6□□□□□ -1.45
SMC4-223ENST00000493695 LEO1Q8WVC0 666 aaPredicted RBP6□□□□□ -1.45
SMC4-223ENST00000493695 APPBP2Q92624 585 aa6□□□□□ -1.45
SMC4-223ENST00000493695 PAWRQ96IZ0 340 aaKnown RBP6□□□□□ -1.45
SMC4-223ENST00000493695 FEZ1Q99689 392 aa6□□□□□ -1.45
SMC4-223ENST00000493695 EMC7Q9NPA0 242 aa6□□□□□ -1.45
SMC4-223ENST00000493695 KLHL11Q9NVR0 708 aa6□□□□□ -1.45
SMC4-223ENST00000493695 FANCLQ9NW38 375 aa6□□□□□ -1.45
SMC4-223ENST00000493695 RNF7Q9UBF6 113 aa6□□□□□ -1.45
SMC4-223ENST00000493695 DPP7Q9UHL4 492 aa6□□□□□ -1.45
SMC4-223ENST00000493695 AATKQ6ZMQ8 1374 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 A0A1B0GTW7 788 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 FAM83GA6ND36 823 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 MARCH11A6NNE9 402 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 PJA2O43164 708 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 HSD11B2P80365 405 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 SIM1P81133 766 aaPredicted RBP5.99□□□□□ -1.45
SMC4-223ENST00000493695 METRNLQ641Q3 311 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 SREK1Q8WXA9 508 aaKnown RBP5.99□□□□□ -1.45
SMC4-223ENST00000493695 STON2Q8WXE9 905 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 PTCD3Q96EY7 689 aaKnown RBP5.99□□□□□ -1.45
SMC4-223ENST00000493695 FUBP3Q96I24 572 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMC4-223ENST00000493695 RNPEPQ9H4A4 650 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 FRMD4BQ9Y2L6 1034 aa5.99□□□□□ -1.45
SMC4-223ENST00000493695 GPANK1O95872 356 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 ELANEP08246 267 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 ZNF362Q5T0B9 420 aaPredicted RBP5.98□□□□□ -1.45
SMC4-223ENST00000493695 FAM180AQ6UWF9 173 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 RASSF3Q86WH2 238 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 SLC41A1Q8IVJ1 513 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 ACTRT2Q8TDY3 377 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 RIN2Q8WYP3 895 aaPredicted RBP5.98□□□□□ -1.45
SMC4-223ENST00000493695 HEPHQ9BQS7 1158 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 AIFM2Q9BRQ8 373 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 MRI1Q9BV20 369 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 GALNT9Q9HCQ5 603 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 DMTF1Q9Y222 760 aa5.98□□□□□ -1.45
SMC4-223ENST00000493695 POMCP01189 267 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 ECHS1P30084 290 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 CXADRP78310 365 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 OCA2Q04671 838 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 PAPD7Q5XG87 772 aaKnown RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 AFMIDQ63HM1 303 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 B3GNTL1Q67FW5 361 aaPredicted RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 TRMT2AQ8IZ69 625 aaKnown RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 FAM98AQ8NCA5 519 aaKnown RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 USP7Q93009 1102 aa5.97□□□□□ -1.45
SMC4-223ENST00000493695 RNPC3Q96LT9 517 aaKnown RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 SENP6Q9GZR1 1112 aaPredicted RBP5.97□□□□□ -1.45
SMC4-223ENST00000493695 INO80B-WBP1J3KQ70 363 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 MGST3O14880 152 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 MATN4O95460 622 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 ATP5JP18859 108 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 FGFR4P22455 802 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 RARRES1P49788 294 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMC4-223ENST00000493695 DRC7Q8IY82 874 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 PQLC1Q8N2U9 271 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 INO80BQ9C086 356 aaPredicted RBP5.96□□□□□ -1.46
SMC4-223ENST00000493695 IL17RBQ9NRM6 502 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 ASB6Q9NWX5 421 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 MOCS1Q9NZB8 636 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 USP25Q9UHP3 1055 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 ZBTB21Q9ULJ3 1066 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 PNPLA7Q6ZV29 1317 aa5.96□□□□□ -1.46
SMC4-223ENST00000493695 SETD1BQ9UPS6 1966 aaKnown RBP5.95□□□□□ -1.46
SMC4-223ENST00000493695 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 SCAPQ12770 1279 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 PDCD1Q15116 288 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 MST1LQ2TV78 715 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 ZNF529Q6P280 563 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 ZNF572Q7Z3I7 529 aaPredicted RBP5.95□□□□□ -1.46
SMC4-223ENST00000493695 GPR156Q8NFN8 814 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 OR7D4Q8NG98 312 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 KLK15Q9H2R5 256 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 LDAHQ9H6V9 325 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms