RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 OR5B17Q8NGF7 314 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 KIFAP3Q92845 792 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 KLRG1Q96E93 195 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 BRCA1P38398 1863 aaKnown RBP13.35□□□□□ -0.27
HMGN1-220ENST00000492280 GOLGA6L10A0A0M3HER8 536 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 TULP2O00295 520 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 DGAT1O75907 488 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 GJB1P08034 283 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 MYZAPP0CAP1 466 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 RFX1P22670 979 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 GPC3P51654 580 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 CDR2Q01850 454 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 ZNF394Q53GI3 561 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 ODF2Q5BJF6 829 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 MOB2Q70IA6 237 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 ZBTB33Q86T24 672 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 MDM1Q8TC05 714 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 APOBEC3GQ9HC16 384 aaKnown RBP13.35□□□□□ -0.27
HMGN1-220ENST00000492280 TMBIM4Q9HC24 238 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 FBXO40Q9UH90 709 aa13.35□□□□□ -0.27
HMGN1-220ENST00000492280 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 P4HA2O15460 535 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 RARAP10276 462 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 GLRA2P23416 452 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 LSP1P33241 339 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 TNFSF9P41273 254 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 SEL1L2Q5TEA6 688 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 ZDHHC24Q6UX98 284 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 UBL4BQ8N7F7 174 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 IFT74Q96LB3 600 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 MFSD14AQ96MC6 490 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 AS3MTQ9HBK9 375 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 ARHGAP28Q9P2N2 729 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 FOXO6A8MYZ6 492 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-220ENST00000492280 KIAA0391O15091 583 aaKnown RBP13.34□□□□□ -0.27
HMGN1-220ENST00000492280 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 MAGOHP61326 146 aaKnown RBP13.34□□□□□ -0.27
HMGN1-220ENST00000492280 IFFO1Q0D2I5 559 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 SUPT20HL1Q3ZLR7 823 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 FAM182AQ5T1J6 154 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 EPB41L4BQ9H329 900 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
HMGN1-220ENST00000492280 VNN1O95497 513 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 PGK2P07205 417 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.27
HMGN1-220ENST00000492280 OSTNP61366 133 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 CRELD2Q6UXH1 353 aaPredicted RBP13.33□□□□□ -0.27
HMGN1-220ENST00000492280 KDM7AQ6ZMT4 941 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 LRRC71Q8N4P6 559 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 CD101Q93033 1021 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 FBXL18Q96ME1 805 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 ZNF302Q9NR11 478 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 CHST7Q9NS84 486 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.27
HMGN1-220ENST00000492280 AGO2Q9UKV8 859 aaKnown RBP13.33□□□□□ -0.27
HMGN1-220ENST00000492280 ADM5C9JUS6 153 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 PHF2O75151 1096 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 CAND2O75155 1236 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 PTGIRP43119 386 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 VGLL4Q14135 290 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 LY6KQ17RY6 165 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 NCAPG2Q86XI2 1143 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 ACSF2Q96CM8 615 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-220ENST00000492280 MTFR1LQ9H019 292 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 ATP8B3O60423 1300 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 E7EVH7 732 aa13.33□□□□□ -0.28
HMGN1-220ENST00000492280 FZD9O00144 591 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms