RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SP100P23497 879 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 CDC25AP30304 524 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 CA8P35219 290 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 GRM5P41594 1212 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 CLCN5P51795 746 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PTPN5P54829 565 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ELAVL2Q12926 359 aaKnown RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 UPP1Q16831 310 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ATF7IP2Q5U623 682 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 KRT79Q5XKE5 535 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 DTHD1Q6ZMT9 781 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 CCDC149Q6ZUS6 474 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 SUGP1Q8IWZ8 645 aaKnown RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 SPIRE2Q8WWL2 714 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 RIN2Q8WYP3 895 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 RABGGTAQ92696 567 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 NXPE3Q969Y0 559 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ACSF2Q96CM8 615 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 IFT74Q96LB3 600 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PNMA5Q96PV4 448 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ADPGKQ9BRR6 497 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 TTPALQ9BTX7 342 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 RUSC1Q9BVN2 902 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PRKD2Q9BZL6 878 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 SMOC2Q9H3U7 446 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 POLD4Q9HCU8 107 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 KCND2Q9NZV8 630 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 IGSF9Q9P2J2 1179 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 CACNG4Q9UBN1 327 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PTPRZ1P23471 2315 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 FAM186AA6NE01 2351 aa9.21□□□□□ -0.93
SMARCB1-207ENST00000491967 SMIM28A0A1B0GU29 152 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 ST18O60284 1047 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 TBC1D4O60343 1298 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 HIP1RO75146 1068 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 HNRNPA1P09651 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 MCF2P10911 925 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 KCNE1P15382 129 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 NPR3P17342 541 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 HOXA9P31269 272 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 MCM2P49736 904 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 MRE11P49959 708 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC12A3P55017 1021 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 TDGQ13569 410 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 GNL2Q13823 731 aaKnown RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 RAB33AQ14088 237 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 UVSSAQ2YD98 709 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 FAM171A1Q5VUB5 890 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 PDXDC1Q6P996 788 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 DCLRE1AQ6PJP8 1040 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 APBB1IPQ7Z5R6 666 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 PALB2Q86YC2 1186 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 SYT2Q8N9I0 419 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 TMEM161BQ8NDZ6 487 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 STAMQ92783 540 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 DRC1Q96MC2 740 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 UROC1Q96N76 676 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 CDT1Q9H211 546 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 KCNG1Q9UIX4 513 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 FBXW11Q9UKB1 542 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 DUSP12Q9UNI6 340 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 KIF3AQ9Y496 699 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 BACE2Q9Y5Z0 518 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 ZFHX2Q9C0A1 2572 aaPredicted RBP9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 CLUHO75153 1309 aa9.21□□□□□ -0.94
SMARCB1-207ENST00000491967 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 PROB1E7EW31 1015 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ADAM12O43184 909 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 SPATA31D3P0C874 917 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 LAMP2P13473 410 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 PEX3P56589 373 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 DMP1Q13316 513 aaPredicted RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 MRPL58Q14197 206 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 TMEM119Q4V9L6 283 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 PRSS55Q6UWB4 352 aaPredicted RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 SPATA31D4Q6ZUB0 917 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 TMEM105Q8N8V8 129 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 C3orf58Q8NDZ4 430 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 SMG7Q92540 1137 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 AK8Q96MA6 479 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ZMAT2Q96NC0 199 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 TBC1D32Q96NH3 1257 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 MYADMQ96S97 322 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 TARS2Q9BW92 718 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 MRPL4Q9BYD3 311 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms