RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PALB2Q86YC2 1186 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 ZDHHC14Q8IZN3 488 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 GSTCDQ8NEC7 633 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 VN1R3Q9BXE9 311 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 C11orf16Q9NQ32 467 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 ZDHHC7Q9NXF8 308 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 SLC16A4O15374 487 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 TOM1L1O75674 476 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 FAM13AO94988 1023 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 RAD51AP2Q09MP3 1159 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 ZPBP2Q6X784 338 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 TAS1R1Q7RTX1 841 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 MMTAG2Q9BU76 263 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 RUSC1Q9BVN2 902 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 TARS2Q9BW92 718 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 RHOBTB2Q9BYZ6 727 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 GPR62Q9BZJ7 368 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 NUB1Q9Y5A7 615 aa18.14■□□□□ 0.49
PDLIM2-217ENST00000491330 SFI1A8K8P3 1242 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 XPOTO43592 962 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 OSTNP61366 133 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 SF3A1Q15459 793 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 PSMD5Q16401 504 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 RNF168Q8IYW5 571 aaPredicted RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 MYCT1Q8N699 235 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 KREMEN2Q8NCW0 462 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 PIK3R5Q8WYR1 880 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 SMG7Q92540 1137 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 IRF2BPLQ9H1B7 796 aa18.13■□□□□ 0.49
PDLIM2-217ENST00000491330 C2CD4DB7Z1M9 353 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 PTGESO14684 152 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 XYLBO75191 536 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 GBP2P32456 591 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 LIG4P49917 911 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 DHX8Q14562 1220 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 HFE2Q6ZVN8 426 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 ANKS3Q6ZW76 656 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 GPBP1Q86WP2 473 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 GLYCTKQ8IVS8 523 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 PNMA5Q96PV4 448 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 CDT1Q9H211 546 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 ZSCAN16Q9H4T2 348 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 PARVGQ9HBI0 331 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 ANKFY1Q9P2R3 1169 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 LIMD1Q9UGP4 676 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 USP20Q9Y2K6 914 aa18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 MORC2Q9Y6X9 1032 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-217ENST00000491330 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 TTLL13PA6NNM8 815 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 KIF4AO95239 1232 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 ELF1P32519 619 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 SLC12A3P55017 1021 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 TMEM119Q4V9L6 283 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 RTL10Q7L3V2 364 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 KCNK18Q7Z418 384 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 DAW1Q8N136 415 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 FBXL6Q8N531 539 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 NXPE3Q969Y0 559 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 MFSD1Q9H3U5 465 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 PLEKHA5Q9HAU0 1116 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 IGSF9Q9P2J2 1179 aa18.11■□□□□ 0.49
PDLIM2-217ENST00000491330 H7C4K7 107 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 TGM5O43548 720 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 CLTAP09496 248 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 HNRNPA1P09651 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 MARCKSP29966 332 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 UVSSAQ2YD98 709 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 GLRA4Q5JXX5 417 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 PPM1LQ5SGD2 360 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 HAUS6Q7Z4H7 955 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 TMEM161BQ8NDZ6 487 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 B3GALT6Q96L58 329 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 PPP1R10Q96QC0 940 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 TSPAN18Q96SJ8 248 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 PRKD2Q9BZL6 878 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 WDR6Q9NNW5 1121 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 RAPGEFL1Q9UHV5 662 aa18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 ZFP37Q9Y6Q3 630 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 SPTBN5Q9NRC6 3674 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-217ENST00000491330 K7ENM7 598 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 HNRNPDLO14979 420 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 TRAK2O60296 914 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 ZMYND10O75800 440 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 BRD1O95696 1058 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms