RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 FBXO18Q8NFZ0 1043 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 CASS4Q9NQ75 786 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 ARHGEF17Q96PE2 2063 aaPredicted RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 RPTORQ8N122 1335 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 MGST3O14880 152 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 MATN4O95460 622 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 SNRPA1P09661 255 aaKnown RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 ADCYAP1R1P41586 468 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 KRTAP10-9P60411 292 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 BROXQ5VW32 411 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 B3GNTL1Q67FW5 361 aaPredicted RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 DHX37Q8IY37 1157 aaKnown RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 PPM1KQ8N3J5 372 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 PAWRQ96IZ0 340 aaKnown RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 REXO4Q9GZR2 422 aaKnown RBP5.79□□□□□ -1.48
PHC3-213ENST00000491258 TBCCD1Q9NVR7 557 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 LRIT1Q9P2V4 623 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 EDARQ9UNE0 448 aa5.79□□□□□ -1.48
PHC3-213ENST00000491258 RBMXL2O75526 392 aaKnown RBP5.78□□□□□ -1.48
PHC3-213ENST00000491258 ADSLP30566 484 aaPredicted RBP5.78□□□□□ -1.48
PHC3-213ENST00000491258 MRPS35P82673 323 aaKnown RBP5.78□□□□□ -1.48
PHC3-213ENST00000491258 HOMER1Q86YM7 354 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 NIM1KQ8IY84 436 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
PHC3-213ENST00000491258 AHI1Q8N157 1196 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 SLC5A5Q92911 643 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 NINJ1Q92982 152 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 FUBP3Q96I24 572 aaKnown RBP eCLIP5.78□□□□□ -1.48
PHC3-213ENST00000491258 TARS2Q9BW92 718 aaKnown RBP5.78□□□□□ -1.48
PHC3-213ENST00000491258 EMC7Q9NPA0 242 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 SEMA4GQ9NTN9 838 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 RNF7Q9UBF6 113 aa5.78□□□□□ -1.48
PHC3-213ENST00000491258 A0A1B0GTW7 788 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
PHC3-213ENST00000491258 AKR1B10O60218 316 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 PHF2O75151 1096 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 RARRES1P49788 294 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 CXADRP78310 365 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 OCA2Q04671 838 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 TKFCQ3LXA3 575 aa5.77□□□□□ -1.49
PHC3-213ENST00000491258 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
PHC3-213ENST00000491258 FGFR4P22455 802 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 ABCG1P45844 678 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 NHLH1Q02575 133 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 FOXF2Q12947 444 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 UGT8Q16880 541 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 RRP12Q5JTH9 1297 aaKnown RBP5.76□□□□□ -1.49
PHC3-213ENST00000491258 ZNF572Q7Z3I7 529 aaPredicted RBP5.76□□□□□ -1.49
PHC3-213ENST00000491258 RASSF3Q86WH2 238 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 DRC7Q8IY82 874 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 SRRM1Q8IYB3 904 aaKnown RBP5.76□□□□□ -1.49
PHC3-213ENST00000491258 ACTRT2Q8TDY3 377 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 UHRF1Q96T88 793 aaPredicted RBP5.76□□□□□ -1.49
PHC3-213ENST00000491258 RNPEPQ9H4A4 650 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 GALNT9Q9HCQ5 603 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 FOXJ2Q9P0K8 574 aa5.76□□□□□ -1.49
PHC3-213ENST00000491258 PNPLA7Q6ZV29 1317 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 LRRC3CA6NJW4 275 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 C1QL1O75973 258 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 RAP2AP10114 183 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 ITGB6P18564 788 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 CACNA2D1P54289 1103 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 HSD11B2P80365 405 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 CDK17Q00537 523 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 RIN2Q8WYP3 895 aaPredicted RBP5.75□□□□□ -1.49
PHC3-213ENST00000491258 AIFM2Q9BRQ8 373 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 MRI1Q9BV20 369 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 SLC29A3Q9BZD2 475 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 KLK15Q9H2R5 256 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 DPP7Q9UHL4 492 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 AATKQ6ZMQ8 1374 aa5.75□□□□□ -1.49
PHC3-213ENST00000491258 GPANK1O95872 356 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 ALOX15P16050 662 aaPredicted RBP5.74□□□□□ -1.49
PHC3-213ENST00000491258 CCT2P78371 535 aaKnown RBP5.74□□□□□ -1.49
PHC3-213ENST00000491258 PDCD1Q15116 288 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 AFMIDQ63HM1 303 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 FOXR2Q6PJQ5 311 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 BHLHA9Q7RTU4 235 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 OR7D4Q8NG98 312 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 SMG7Q92540 1137 aaKnown RBP5.74□□□□□ -1.49
PHC3-213ENST00000491258 APPBP2Q92624 585 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 BOD1Q96IK1 185 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 RNPC3Q96LT9 517 aaKnown RBP5.74□□□□□ -1.49
PHC3-213ENST00000491258 TMEM74BQ9NUR3 256 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 DMTF1Q9Y222 760 aa5.74□□□□□ -1.49
PHC3-213ENST00000491258 MTO1Q9Y2Z2 717 aaKnown RBP5.74□□□□□ -1.49
PHC3-213ENST00000491258 ATRNL1Q5VV63 1379 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 CCDC78A2IDD5 438 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 DNAJC9-AS1A6NH13 148 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 WNT10BO00744 389 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 POMCP01189 267 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 SP140Q13342 867 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.73□□□□□ -1.49
PHC3-213ENST00000491258 CCDC144BQ3MJ40 725 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 AKNAD1Q5T1N1 836 aa5.73□□□□□ -1.49
PHC3-213ENST00000491258 FAM43AQ8N2R8 423 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms