RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ADAM17P78536 824 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 ASTE1Q2TB18 679 aaPredicted RBP15.05■□□□□ 0
SMPD4-219ENST00000491128 GDF6Q6KF10 455 aaPredicted RBP15.05■□□□□ 0
SMPD4-219ENST00000491128 OSBPL7Q9BZF2 842 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 PRMT7Q9NVM4 692 aaPredicted RBP15.05■□□□□ 0
SMPD4-219ENST00000491128 AIPL1Q9NZN9 384 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 UMODL1Q5DID0 1318 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 ADAMTS4O75173 837 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 TFRCP02786 760 aaKnown RBP15.05■□□□□ -0
SMPD4-219ENST00000491128 C4BPAP04003 597 aaKnown RBP15.05■□□□□ -0
SMPD4-219ENST00000491128 PROZP22891 400 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 MAP2K2P36507 400 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 GUCY2FP51841 1108 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 ZNF569Q5MCW4 686 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 CCDC122Q5T0U0 273 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 SH3TC2Q8TF17 1288 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 IQCDQ96DY2 449 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 STK33Q9BYT3 514 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 IFIH1Q9BYX4 1025 aaKnown RBP15.05■□□□□ -0
SMPD4-219ENST00000491128 EDEM3Q9BZQ6 932 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 SEPT11Q9NVA2 429 aaKnown RBP15.05■□□□□ -0
SMPD4-219ENST00000491128 CPSF3Q9UKF6 684 aaKnown RBP15.05■□□□□ -0
SMPD4-219ENST00000491128 Q9Y3F1 56 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 PCDHA13Q9Y5I0 950 aa15.05■□□□□ -0
SMPD4-219ENST00000491128 MGAMO43451 1857 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 MBLAC1A4D2B0 266 aaPredicted RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 LDHAP00338 332 aaKnown RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 HLA-DRAP01903 254 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 SSTR3P32745 418 aaPredicted RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 PIK3CAP42336 1068 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 ETF1P62495 437 aaKnown RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 SPA17Q15506 151 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 CATSPER4Q7RTX7 472 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 EFCAB13Q8IY85 973 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 SLC20A1Q8WUM9 679 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 APOL6Q9BWW8 343 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 KIAA1586Q9HCI6 787 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 TRIP12Q14669 1992 aaPredicted RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 EIF3CLB5ME19 914 aaKnown RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 PHACTR2O75167 634 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 STAG3L1P0CL83 205 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 ABCD1P33897 745 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 SOX5P35711 763 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 TAF3Q5VWG9 929 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 PALB2Q86YC2 1186 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 HELQQ8TDG4 1101 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 JAKMIP2Q96AA8 810 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 EIF3CQ99613 913 aaKnown RBP15.04■□□□□ -0
SMPD4-219ENST00000491128 SPC25Q9HBM1 224 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 TNFSF13BQ9Y275 285 aa15.04■□□□□ -0
SMPD4-219ENST00000491128 KAT6AQ92794 2004 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 RIOK3O14730 519 aaKnown RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 CYP26A1O43174 497 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 N4BP1O75113 896 aaKnown RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 IPO7O95373 1038 aaKnown RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 HOXA11P31270 313 aaPredicted RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 STAT1P42224 750 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 CDK17Q00537 523 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 ZACNQ401N2 412 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 GLYCTKQ8IVS8 523 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 BRSK2Q8IWQ3 736 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 CCDC170Q8IYT3 715 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 MTG1Q9BT17 334 aaPredicted RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 APOBEC3GQ9HC16 384 aaKnown RBP15.03■□□□□ -0
SMPD4-219ENST00000491128 SALL4Q9UJQ4 1053 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 CCP110O43303 1012 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 NPTXRO95502 500 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 NFICP08651 508 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 MAGEA1P43355 309 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 C15orf39Q6ZRI6 1047 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 SLC35F6Q8N357 371 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 TRIM17Q9Y577 477 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 GRIN2DO15399 1336 aa15.03■□□□□ -0
SMPD4-219ENST00000491128 SMIM35A0A1B0GVV1 85 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 LACTBL1A8MY62 500 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 ENC1O14682 589 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 BUB1O43683 1085 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 SGPL1O95470 568 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 HMGCRP04035 888 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 INHAP05111 366 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 KRT19P08727 400 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 SLC47A2Q86VL8 602 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 KCNN1Q92952 543 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 CGRRF1Q99675 332 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 KATNAL1Q9BW62 490 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 NFKBIZQ9BYH8 718 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 GCOM2Q9BZD3 368 aaPredicted RBP15.02■□□□□ -0
SMPD4-219ENST00000491128 CHORDC1Q9UHD1 332 aaPredicted RBP15.02■□□□□ -0
SMPD4-219ENST00000491128 PTCH2Q9Y6C5 1203 aa15.02■□□□□ -0
SMPD4-219ENST00000491128 MYL6P60660 151 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 KRT83P78385 493 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 IRF5Q13568 498 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 PTPROQ16827 1216 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 USP37Q86T82 979 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 KIF18AQ8NI77 898 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 SYN2Q92777 582 aaPredicted RBP15.02□□□□□ -0.01
SMPD4-219ENST00000491128 NT5C1BQ96P26 610 aa15.02□□□□□ -0.01
SMPD4-219ENST00000491128 NUCKS1Q9H1E3 243 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms