RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 ZSWIM1Q9BR11 485 aa4.1□□□□□ -1.75
NEK2-204ENST00000489633 TESQ9UGI8 421 aaKnown RBP4.1□□□□□ -1.75
NEK2-204ENST00000489633 ATP11BQ9Y2G3 1177 aa4.1□□□□□ -1.75
NEK2-204ENST00000489633 CRHR1P34998 444 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 CLRN1P58418 232 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 CCT2P78371 535 aaKnown RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 UGT8Q16880 541 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 ATP13A4Q4VNC1 1196 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 DALRD3Q5D0E6 543 aaKnown RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 FAM47AQ5JRC9 791 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 ZNF362Q5T0B9 420 aaPredicted RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 B3GNTL1Q67FW5 361 aaPredicted RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 MED25Q71SY5 747 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 RASSF3Q86WH2 238 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 MAPKAPK5Q8IW41 473 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 RHOT2Q8IXI1 618 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 TRMT2AQ8IZ69 625 aaKnown RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 DRC1Q96MC2 740 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 Q96MF0 132 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 TOPORSQ9NS56 1045 aaPredicted RBP4.09□□□□□ -1.75
NEK2-204ENST00000489633 KLHL11Q9NVR0 708 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 DPP7Q9UHL4 492 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 TLK1Q9UKI8 766 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 PNPLA7Q6ZV29 1317 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 RPTORQ8N122 1335 aa4.09□□□□□ -1.75
NEK2-204ENST00000489633 CCDC78A2IDD5 438 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 PJA2O43164 708 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 AKR1B10O60218 316 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 MAST3O60307 1309 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 FOSP01100 380 aaPredicted RBP4.08□□□□□ -1.76
NEK2-204ENST00000489633 ATXN1P54253 815 aaKnown RBP4.08□□□□□ -1.76
NEK2-204ENST00000489633 BLOC1S1P78537 153 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 MXRA7P84157 204 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 MST1LQ2TV78 715 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 GLCCI1Q86VQ1 547 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 TMEM132CQ8N3T6 1108 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 RIN2Q8WYP3 895 aaPredicted RBP4.08□□□□□ -1.76
NEK2-204ENST00000489633 UBXN4Q92575 508 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 MFSD3Q96ES6 412 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 LRFN3Q9BTN0 628 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 SPATA5L1Q9BVQ7 753 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 ALOXE3Q9BYJ1 711 aa4.08□□□□□ -1.76
NEK2-204ENST00000489633 UNC13AQ9UPW8 1703 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 ATRNL1Q5VV63 1379 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 AATKQ6ZMQ8 1374 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 GSG1L2A8MUP6 293 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 MGST3O14880 152 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 CDC45O75419 566 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 FDXRP22570 491 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 ID4P47928 161 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 OCA2Q04671 838 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.07□□□□□ -1.76
NEK2-204ENST00000489633 SPDYE7PQ495Y7 208 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 Q6ZVL8 140 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 ZNF572Q7Z3I7 529 aaPredicted RBP4.07□□□□□ -1.76
NEK2-204ENST00000489633 HDGFL2Q7Z4V5 671 aaPredicted RBP4.07□□□□□ -1.76
NEK2-204ENST00000489633 CAGE1Q8TC20 777 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 STON2Q8WXE9 905 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 RNF31Q96EP0 1072 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 KIAA1586Q9HCI6 787 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 NOX1Q9Y5S8 564 aa4.07□□□□□ -1.76
NEK2-204ENST00000489633 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 PHF2O75151 1096 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 PRSS23O95084 383 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 MATN4O95460 622 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 IGLV2-14P01704 120 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 SNRPA1P09661 255 aaKnown RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 RAP2AP10114 183 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 ALOX15P16050 662 aaPredicted RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 ELLP55199 621 aaPredicted RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 SIM1P81133 766 aaPredicted RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 ZNF169Q14929 603 aaPredicted RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 FSCN1Q16658 493 aaKnown RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 AFMIDQ63HM1 303 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 ARMC6Q6NXE6 501 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 Q6ZNX1 250 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 ARHGEF25Q86VW2 580 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 CMIPQ8IY22 773 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 CLRN3Q8NCR9 226 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 OR7D4Q8NG98 312 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 TSPEARQ8WU66 669 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 FUBP3Q96I24 572 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEK2-204ENST00000489633 FEZ1Q99689 392 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 MRI1Q9BV20 369 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 DUSP26Q9BV47 211 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 LDAHQ9H6V9 325 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 WDR26Q9H7D7 661 aa4.06□□□□□ -1.76
NEK2-204ENST00000489633 MRPL42Q9Y6G3 142 aaKnown RBP4.06□□□□□ -1.76
NEK2-204ENST00000489633 COL11A2P13942 1736 aaPredicted RBP4.05□□□□□ -1.76
NEK2-204ENST00000489633 A0A087X0B3 334 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.05□□□□□ -1.76
NEK2-204ENST00000489633 NEMP1O14524 444 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 PDE8AO60658 829 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 C1RP00736 705 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 CDK4P11802 303 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 BPIP17213 487 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 ENPP1P22413 925 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 FGFR4P22455 802 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 SLC6A2P23975 617 aa4.05□□□□□ -1.76
NEK2-204ENST00000489633 SREBF1P36956 1147 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms