RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LRRC53A6NM62 1247 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 CTSHP09668 335 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 STAG3L1P0CL83 205 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 THPOP40225 353 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 KCNJ6P48051 423 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 MGAT3Q09327 533 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 ENOX2Q16206 610 aaKnown RBP23.44■■□□□ 1.34
SMC4-221ENST00000489573 MEA1Q16626 185 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 LMBRD2Q68DH5 695 aaPredicted RBP23.44■■□□□ 1.34
SMC4-221ENST00000489573 TMTC1Q8IUR5 882 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 WDR49Q8IV35 697 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 FBXL13Q8NEE6 735 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 ZNF516Q92618 1163 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 OGDHLQ9ULD0 1010 aa23.44■■□□□ 1.34
SMC4-221ENST00000489573 PTPRJQ12913 1337 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 HTTP42858 3142 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 IL18RAPO95256 599 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 NPTXRO95502 500 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 HNRNPH3P31942 346 aaKnown RBP23.43■■□□□ 1.34
SMC4-221ENST00000489573 AP3M2P53677 418 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 ZACNQ401N2 412 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 CYP26C1Q6V0L0 522 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 FAM228AQ86W67 206 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 DHX38Q92620 1227 aaKnown RBP23.43■■□□□ 1.34
SMC4-221ENST00000489573 FAM212AQ96EL1 285 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 SEZ6LQ9BYH1 1024 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 APEX2Q9UBZ4 518 aa23.43■■□□□ 1.34
SMC4-221ENST00000489573 PIN4Q9Y237 131 aaKnown RBP23.43■■□□□ 1.34
SMC4-221ENST00000489573 ARVCFO00192 962 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 CHRNA1P02708 482 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 C4BPAP04003 597 aaKnown RBP23.42■■□□□ 1.34
SMC4-221ENST00000489573 CXCL8P10145 99 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 RFX1P22670 979 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 TRIM71Q2Q1W2 868 aaKnown RBP23.42■■□□□ 1.34
SMC4-221ENST00000489573 IQCEQ6IPM2 695 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 FBXO46Q6PJ61 603 aaPredicted RBP23.42■■□□□ 1.34
SMC4-221ENST00000489573 TMEM192Q8IY95 271 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 TAS1R2Q8TE23 839 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 MYO6Q9UM54 1294 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 PLAGL2Q9UPG8 496 aa23.42■■□□□ 1.34
SMC4-221ENST00000489573 NOC2LQ9Y3T9 749 aaKnown RBP23.42■■□□□ 1.34
SMC4-221ENST00000489573 SOWAHDA6NJG2 315 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 CAND2O75155 1236 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 GRM5P41594 1212 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 TDRD10Q5VZ19 366 aaKnown RBP23.41■■□□□ 1.34
SMC4-221ENST00000489573 GJB7Q6PEY0 223 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 WDR59Q6PJI9 974 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 SYN2Q92777 582 aaPredicted RBP23.41■■□□□ 1.34
SMC4-221ENST00000489573 SEMA4DQ92854 862 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 FAM84AQ96KN4 292 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 SPAG5Q96R06 1193 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 RAB20Q9NX57 234 aa23.41■■□□□ 1.34
SMC4-221ENST00000489573 AJAP1Q9UKB5 411 aaPredicted RBP23.41■■□□□ 1.34
SMC4-221ENST00000489573 B4GALT4O60513 344 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 RPS6KA5O75582 802 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 BIRC3Q13489 604 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 RAPGEF1Q13905 1077 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 SFMBT2Q5VUG0 894 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 OR5B17Q8NGF7 314 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 ACAP3Q96P50 834 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 CCDC94Q9BW85 323 aaPredicted RBP23.4■■□□□ 1.34
SMC4-221ENST00000489573 DNAJC12Q9UKB3 198 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 MROH7Q68CQ1 1323 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 CDK17Q00537 523 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 E4F1Q66K89 784 aaPredicted RBP23.4■■□□□ 1.34
SMC4-221ENST00000489573 PHLDB3Q6NSJ2 640 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 EIF2AQ9BY44 585 aaKnown RBP23.4■■□□□ 1.34
SMC4-221ENST00000489573 TRPV6Q9H1D0 765 aa23.4■■□□□ 1.34
SMC4-221ENST00000489573 ZC3H11AO75152 810 aaKnown RBP eCLIP23.39■■□□□ 1.334e-12■■■■■ 110
SMC4-221ENST00000489573 LRRN2O75325 713 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 HLA-DRAP01903 254 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 PIK3CAP42336 1068 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 JAM2P57087 298 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 FAM26DQ5JW98 314 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 RAD9BQ6WBX8 426 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 C17orf53Q8N3J3 647 aaPredicted RBP23.39■■□□□ 1.33
SMC4-221ENST00000489573 ZNF333Q96JL9 665 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 CHP1Q99653 195 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 TRIM6Q9C030 488 aaPredicted RBP23.39■■□□□ 1.33
SMC4-221ENST00000489573 ASB7Q9H672 318 aa23.39■■□□□ 1.33
SMC4-221ENST00000489573 DUOXA2Q1HG44 320 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 ARHGEF19Q8IW93 802 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 EFCAB13Q8IY85 973 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 NT5C1BQ96P26 610 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 STK33Q9BYT3 514 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 MTMR12Q9C0I1 747 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 AIPL1Q9NZN9 384 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 ST3GAL5Q9UNP4 418 aa23.38■■□□□ 1.33
SMC4-221ENST00000489573 LACTBL1A8MY62 500 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 MEFVO15553 781 aaPredicted RBP23.37■■□□□ 1.33
SMC4-221ENST00000489573 ZNF500O60304 480 aaPredicted RBP23.37■■□□□ 1.33
SMC4-221ENST00000489573 PHACTR2O75167 634 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 TMEM191BP0C7N4 346 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 TFAMQ00059 246 aaKnown RBP23.37■■□□□ 1.33
SMC4-221ENST00000489573 MTF1Q14872 753 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 PKN2Q16513 984 aaKnown RBP23.37■■□□□ 1.33
SMC4-221ENST00000489573 ASIC2Q16515 512 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 SLC10A6Q3KNW5 377 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 FBXO47Q5MNV8 452 aa23.37■■□□□ 1.33
SMC4-221ENST00000489573 UBXN11Q5T124 520 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms