RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-233ENST00000489352 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 SMARCD2Q92925 531 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 ASB16Q96NS5 453 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF577Q9BSK1 485 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 NUSAP1Q9BXS6 441 aaKnown RBP12.93□□□□□ -0.34
HDAC6-233ENST00000489352 AGPAT5Q9NUQ2 364 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 VWA8A3KMH1 1905 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 SPTA1P02549 2419 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 SPECC1L-ADORA2AF8WAN1 911 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-233ENST00000489352 OR1D2P34982 312 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 VIPR2P41587 438 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 MAPK8P45983 427 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 SOX9P48436 509 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 IRX4P78413 519 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-233ENST00000489352 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 CYP2U1Q7Z449 544 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 HDDC3Q8N4P3 179 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 LZTS2Q9BRK4 669 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 AVENQ9NQS1 362 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-233ENST00000489352 SUCLA2Q9P2R7 463 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-233ENST00000489352 CFAP46Q8IYW2 2715 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 PI4KAP42356 2102 aa12.92□□□□□ -0.34
HDAC6-233ENST00000489352 CAPN9O14815 690 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 DCLK1O15075 740 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF862O60290 1169 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 SMARCA1P28370 1054 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 ELF1P32519 619 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 GNAQP50148 359 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 ATXN3P54252 364 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-233ENST00000489352 PRKCEQ02156 737 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 NCBP1Q09161 790 aaKnown RBP12.91□□□□□ -0.34
HDAC6-233ENST00000489352 DRP2Q13474 957 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 HAUS6Q7Z4H7 955 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 HACE1Q8IYU2 909 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-233ENST00000489352 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 SLITRK6Q9H5Y7 841 aa12.91□□□□□ -0.34
HDAC6-233ENST00000489352 MYBPHLA2RUH7 354 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 PRRG1O14668 218 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 CHADO15335 359 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 C1QL1O75973 258 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 CTHP32929 405 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 CCINQ13939 588 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 RAB33AQ14088 237 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 MTERF2Q49AM1 385 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 RAB44Q7Z6P3 723 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 C11orf74Q86VG3 221 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 ELMOD1Q8N336 334 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 ZSCAN18Q8TBC5 510 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 ZFP42Q96MM3 310 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
HDAC6-233ENST00000489352 SEPT9Q9UHD8 586 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-233ENST00000489352 WDR27A2RRH5 827 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 ATXN7O15265 892 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-233ENST00000489352 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-233ENST00000489352 MICAL2O94851 1124 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
HDAC6-233ENST00000489352 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 TXNDC11Q6PKC3 985 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 PIGKQ92643 395 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 ANO3Q9BYT9 981 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 IPPQ9Y573 584 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 ADAMTS9Q9P2N4 1935 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 PLXNB3Q9ULL4 1909 aa12.89□□□□□ -0.35
HDAC6-233ENST00000489352 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
HDAC6-233ENST00000489352 ADAM12O43184 909 aa12.88□□□□□ -0.35
HDAC6-233ENST00000489352 ERLIN2O94905 339 aa12.88□□□□□ -0.35
HDAC6-233ENST00000489352 DHPSP49366 369 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-233ENST00000489352 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
HDAC6-233ENST00000489352 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC6-233ENST00000489352 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
HDAC6-233ENST00000489352 PTPAQ15257 358 aa12.88□□□□□ -0.35
HDAC6-233ENST00000489352 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms