RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SERPINB3P29508 390 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 KIR2DL3P43628 341 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 HTR3AP46098 478 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 CCT2P78371 535 aaKnown RBP5.42□□□□□ -1.54
XRN1-213ENST00000489241 KLF10Q13118 480 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 MUM1L1Q5H9M0 696 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 MAMDC4Q6UXC1 1216 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 BTNL9Q6UXG8 535 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 Q6ZSN1 163 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 TAS1R1Q7RTX1 841 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 CLEC14AQ86T13 490 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 MORC1Q86VD1 984 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 ZNF503Q96F45 646 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 ELAC2Q9BQ52 826 aaKnown RBP5.42□□□□□ -1.54
XRN1-213ENST00000489241 NAA15Q9BXJ9 866 aaKnown RBP5.42□□□□□ -1.54
XRN1-213ENST00000489241 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 SLC6A15Q9H2J7 730 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 TMEM60Q9H2L4 133 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 FAM204AQ9H8W3 233 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 PHTF1Q9UMS5 762 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 DAAM1Q9Y4D1 1078 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 IPPQ9Y573 584 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 A0A1W2PR48 441 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 CCDC154A6NI56 674 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 NPIPB8E9PQR5 432 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 HTRA2O43464 458 aaPredicted RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 PHF2O75151 1096 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 JUNP05412 331 aaKnown RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 LTA4HP09960 611 aaKnown RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 VSIG10L2P0DP72 767 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 SLC5A1P13866 664 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 SLC16A1P53985 500 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 ATP2C1P98194 919 aaPredicted RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 DHX8Q14562 1220 aaKnown RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 ADRM1Q16186 407 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 PGS1Q32NB8 556 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 KRT40Q6A162 431 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 C11orf96Q7Z7L8 435 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 DENND1CQ8IV53 801 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 FAM156AQ8NDB6 213 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 PARD3BQ8TEW8 1205 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 NRG4Q8WWG1 115 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 FDXACB1Q9BRP7 624 aaPredicted RBP5.41□□□□□ -1.54
XRN1-213ENST00000489241 ADI1Q9BV57 179 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 GREM2Q9H772 168 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 INTUQ9ULD6 942 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 RPTORQ8N122 1335 aa5.41□□□□□ -1.54
XRN1-213ENST00000489241 PMS2P1A4D2B8 440 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 B3GALT2O43825 422 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 UBXN7O94888 489 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ZNF202O95125 648 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ALDH2P05091 517 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 GSPT1P15170 499 aaKnown RBP5.4□□□□□ -1.54
XRN1-213ENST00000489241 ACRV1P26436 265 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 WASP42768 502 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ADCY7P51828 1080 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 BPIFB4P59827 614 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 PTH1RQ03431 593 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ABHD18Q0P651 414 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 MALLQ13021 153 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 GAGE13Q4V321 117 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 KIAA0319LQ8IZA0 1049 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 CAMKK1Q8N5S9 505 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ANKRD53Q8N9V6 530 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 GLB1L3Q8NCI6 653 aaPredicted RBP5.4□□□□□ -1.54
XRN1-213ENST00000489241 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 GPR156Q8NFN8 814 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 OR14K1Q8NGZ2 314 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 RABGGTAQ92696 567 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 EXTL1Q92935 676 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 GJA10Q969M2 543 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 LRFN3Q9BTN0 628 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 KLHL11Q9NVR0 708 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 SCOCQ9UIL1 159 aa5.4□□□□□ -1.54
XRN1-213ENST00000489241 ING1Q9UK53 422 aaPredicted RBP5.4□□□□□ -1.54
XRN1-213ENST00000489241 FAM227AF5H4B4 570 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 MTSS1O43312 755 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 PRAMEF4O60810 478 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 DTNBO60941 627 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 ALDH1A2O94788 518 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 MYL3P08590 195 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
XRN1-213ENST00000489241 WNT3AP56704 352 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 HGFACQ04756 655 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 FOXL1Q12952 345 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 UBE3CQ15386 1083 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 KIAA0753Q2KHM9 967 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 C4orf46Q504U0 113 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 CCDC149Q6ZUS6 474 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 TOGARAM2Q6ZUX3 1019 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 ZNF808Q8N4W9 903 aaPredicted RBP5.39□□□□□ -1.55
XRN1-213ENST00000489241 SNX33Q8WV41 574 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 RIN2Q8WYP3 895 aaPredicted RBP5.39□□□□□ -1.55
XRN1-213ENST00000489241 RPL10LQ96L21 214 aaKnown RBP5.39□□□□□ -1.55
XRN1-213ENST00000489241 NELFAQ9H3P2 528 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 PTPRHQ9HD43 1115 aa5.39□□□□□ -1.55
XRN1-213ENST00000489241 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms