RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 RUSC1Q9BVN2 902 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 POLD4Q9HCU8 107 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 PTPRHQ9HD43 1115 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 KMT5AQ9NQR1 393 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 TOPORSQ9NS56 1045 aaPredicted RBP14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 IGSF9Q9P2J2 1179 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 CACNG4Q9UBN1 327 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 GDAQ9Y2T3 454 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 CLUHO75153 1309 aa14.36□□□□□ -0.11
ATPAF2-207ENST00000488753 SLC26A4O43511 780 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 TDGQ13569 410 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 XKR4Q5GH76 650 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 FAM171A1Q5VUB5 890 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 DCLRE1AQ6PJP8 1040 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 KCNK18Q7Z418 384 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 PRSS33Q8NF86 280 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 LNX1Q8TBB1 728 aaPredicted RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 HASPINQ8TF76 798 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 NXPE3Q969Y0 559 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 AK8Q96MA6 479 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 PRKD2Q9BZL6 878 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 IRF2BPLQ9H1B7 796 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 CDT1Q9H211 546 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 KCNK12Q9HB15 430 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
ATPAF2-207ENST00000488753 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 RFPL2O75678 378 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 ZMYND10O75800 440 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 B3GAT3O94766 335 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 MCF2P10911 925 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 PROZP22891 400 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 VCPP55072 806 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 UPP1Q16831 310 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 ALKAL1Q6UXT8 129 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 DDX27Q96GQ7 796 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 CLSTN3Q9BQT9 956 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 CXCL16Q9H2A7 254 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 SMC3Q9UQE7 1217 aa14.34□□□□□ -0.11
ATPAF2-207ENST00000488753 DENND4AQ7Z401 1863 aa14.33□□□□□ -0.11
ATPAF2-207ENST00000488753 SMIM28A0A1B0GU29 152 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 VWA3AA6NCI4 1184 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 BMP15O95972 392 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 HNRNPA1P09651 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 SPATA31D3P0C874 917 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 PLS3P13797 630 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 SCP2P22307 547 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 FGFR3P22607 806 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 HOXA9P31269 272 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 MRE11P49959 708 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 SMTNP53814 917 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 STRN3Q13033 797 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 PSMD5Q16401 504 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 PRSS55Q6UWB4 352 aaPredicted RBP14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 RTL10Q7L3V2 364 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 TAS1R3Q7RTX0 852 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 ALYREFQ86V81 257 aaKnown RBP14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 GLYCTKQ8IVS8 523 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 KCNN1Q92952 543 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 CDK5RAP3Q96JB5 506 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 SMOC2Q9H3U7 446 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 PIDD1Q9HB75 910 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 DUSP12Q9UNI6 340 aa14.33□□□□□ -0.12
ATPAF2-207ENST00000488753 H0YCG3 227 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 ABLIM1O14639 778 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 SLC16A4O15374 487 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 TOM1L1O75674 476 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 POU2F2P09086 479 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 KCNE1P15382 129 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 GBP2P32456 591 aaPredicted RBP14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 CLCN5P51795 746 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 CLCNKBP51801 687 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 SLC12A3P55017 1021 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 TCF15Q12870 199 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 RAB33AQ14088 237 aa14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 ZRSR1Q15695 479 aaKnown RBP14.32□□□□□ -0.12
ATPAF2-207ENST00000488753 TMEM119Q4V9L6 283 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms