RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
CNN3-206ENST00000487539 TNFAIP1Q13829 316 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 NFE2L2Q16236 605 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 KIZQ2M2Z5 673 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 ANO1Q5XXA6 986 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 LIPIQ6XZB0 460 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 TRPV1Q8NER1 839 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 TTLL11Q8NHH1 800 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
CNN3-206ENST00000487539 UBXN4Q92575 508 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 SAMD11Q96NU1 681 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 DNAJC2Q99543 621 aaKnown RBP5.54□□□□□ -1.52
CNN3-206ENST00000487539 ZNF341Q9BYN7 854 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 FLRT1Q9NZU1 646 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 ZHX2Q9Y6X8 837 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 DLG5Q8TDM6 1919 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 MED19A0JLT2 244 aaPredicted RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 EPOPA6NHQ4 379 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 IL1R1P14778 569 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 PMLP29590 882 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 GPR85P60893 370 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 TLE2Q04725 743 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 HNRNPA0Q13151 305 aaKnown RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 YOD1Q5VVQ6 348 aaPredicted RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 MAMDC2Q7Z304 686 aaPredicted RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 IFNL3Q8IZI9 196 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 TTC9BQ8N6N2 239 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.53□□□□□ -1.52
CNN3-206ENST00000487539 SMCR8Q8TEV9 937 aaPredicted RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 USP6NLQ92738 828 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 MYD88Q99836 296 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 PCDH18Q9HCL0 1135 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 FBXL7Q9UJT9 491 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 SIT1Q9Y3P8 196 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 AFG3L2Q9Y4W6 797 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 C5orf42Q9H799 3197 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 GBF1Q92538 1859 aa5.53□□□□□ -1.52
CNN3-206ENST00000487539 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
CNN3-206ENST00000487539 PTPRFP10586 1907 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 TRBV23-1A0A0A0MS06 115 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 FAM221BA6H8Z2 402 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 KRIT1O00522 736 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 AQP7O14520 342 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
CNN3-206ENST00000487539 SGSM2O43147 1006 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 APPP05067 770 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 PCCAP05165 728 aaPredicted RBP5.52□□□□□ -1.53
CNN3-206ENST00000487539 NAT1P18440 290 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 RABGGTBP53611 331 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 FOXO4P98177 505 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 CHRNDQ07001 517 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 TCF15Q12870 199 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 NTRK3Q16288 839 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 FAM110CQ1W6H9 321 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 VWA3BQ502W6 1294 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 STEAP3Q658P3 488 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 LBX2Q6XYB7 198 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 ETV3LQ6ZN32 361 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 MILR1Q7Z6M3 343 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 B3GNT8Q7Z7M8 397 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 DVL3Q92997 716 aaPredicted RBP5.52□□□□□ -1.53
CNN3-206ENST00000487539 CERS4Q9HA82 394 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 TXNRD2Q9NNW7 524 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 NGRNQ9NPE2 291 aaKnown RBP5.52□□□□□ -1.53
CNN3-206ENST00000487539 TSPYL4Q9UJ04 414 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 MTCH2Q9Y6C9 303 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 ATRXP46100 2492 aa5.52□□□□□ -1.53
CNN3-206ENST00000487539 PHIPQ8WWQ0 1821 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 TRIM75PA6NK02 468 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 ATF2P15336 505 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 ADCYAP1R1P41586 468 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 FKBP1AP62942 108 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 FPGSQ05932 587 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 TCP10Q12799 353 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 AAK1Q2M2I8 961 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 EMC4Q5J8M3 183 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 MFSD14BQ5SR56 506 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 TMEM240Q5SV17 173 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 APOBEC3HQ6NTF7 200 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 FASTKD5Q7L8L6 764 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 ZC3H18Q86VM9 953 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 MIB1Q86YT6 1006 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 CHST13Q8NET6 341 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 PHOSPHO1Q8TCT1 267 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 PTPRN2Q92932 1015 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 DDX11Q96FC9 970 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 CDC5LQ99459 802 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 DNAJC7Q99615 494 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 YIPF4Q9BSR8 244 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 ALG1Q9BT22 464 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 DHRS4Q9BTZ2 278 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 ALG13Q9NP73 1137 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 C11orf21Q9P2W6 132 aa5.51□□□□□ -1.53
CNN3-206ENST00000487539 DDX20Q9UHI6 824 aaKnown RBP5.51□□□□□ -1.53
CNN3-206ENST00000487539 PLA2G2DQ9UNK4 145 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms